RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MFAP3LO75121 409 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 METAP1P53582 386 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 NRG1Q02297 640 aaPredicted RBP18.33■□□□□ 0.52
CLK4-211ENST00000522556 RPL6Q02878 288 aaKnown RBP18.33■□□□□ 0.52
CLK4-211ENST00000522556 CREB5Q02930 508 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 SLC12A1Q13621 1099 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 RWDD4Q6NW29 188 aaKnown RBP18.33■□□□□ 0.52
CLK4-211ENST00000522556 SARM1Q6SZW1 724 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 SLFN11Q7Z7L1 901 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 FAM124AQ86V42 546 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 CPNE8Q86YQ8 564 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 FRS2Q8WU20 508 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 PRCCQ92733 491 aaPredicted RBP18.33■□□□□ 0.52
CLK4-211ENST00000522556 PTPRN2Q92932 1015 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 CHP1Q99653 195 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 OSBPL2Q9H1P3 480 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 SERGEFQ9UGK8 458 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 VPS51Q9UID3 782 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 BZW2Q9Y6E2 419 aaKnown RBP18.33■□□□□ 0.52
CLK4-211ENST00000522556 BCLAF3A2AJT9 711 aaKnown RBP18.32■□□□□ 0.52
CLK4-211ENST00000522556 ANKRD62A6NC57 917 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 MAP3K13O43283 966 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 SRPRAP08240 638 aaKnown RBP18.32■□□□□ 0.52
CLK4-211ENST00000522556 OR1E1P30953 314 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 ACVRL1P37023 503 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 ST8SIA6P61647 398 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 TBX2Q13207 712 aaPredicted RBP18.32■□□□□ 0.52
CLK4-211ENST00000522556 SEMA3BQ13214 749 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 ARID5BQ14865 1188 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 ASTE1Q2TB18 679 aaPredicted RBP18.32■□□□□ 0.52
CLK4-211ENST00000522556 ARL13BQ3SXY8 428 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 PLA2G2CQ5R387 149 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 PPP1R2P3Q6NXS1 205 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 SETD3Q86TU7 594 aaPredicted RBP18.32■□□□□ 0.52
CLK4-211ENST00000522556 STK40Q8N2I9 435 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 ABHD10Q9NUJ1 306 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 TMEM74BQ9NUR3 256 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 PPARGC1AQ9UBK2 798 aaKnown RBP18.32■□□□□ 0.52
CLK4-211ENST00000522556 PCSK1NQ9UHG2 260 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 DNAI1Q9UI46 699 aa18.32■□□□□ 0.52
CLK4-211ENST00000522556 RNF103O00237 685 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 SMAD6O43541 496 aaKnown RBP18.31■□□□□ 0.52
CLK4-211ENST00000522556 CREB3O43889 395 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 GDF9O60383 454 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 RHOBTB1O94844 696 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 ITPKAP23677 461 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 TRIM14Q14142 442 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 CCDC122Q5T0U0 273 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 ALKBH5Q6P6C2 394 aaKnown RBP18.31■□□□□ 0.52
CLK4-211ENST00000522556 PRR23CQ6ZRP0 262 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 Q6ZVU0 165 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 LPCAT2Q7L5N7 544 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 OR8K1Q8NGG5 319 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 TBC1D31Q96DN5 1066 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 TOE1Q96GM8 510 aaKnown RBP18.31■□□□□ 0.52
CLK4-211ENST00000522556 LOXL4Q96JB6 756 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 HSPA12BQ96MM6 686 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 FAM129BQ96TA1 746 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 SNRNP25Q9BV90 132 aaKnown RBP18.31■□□□□ 0.52
CLK4-211ENST00000522556 TRIM5Q9C035 493 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 RSPH9Q9H1X1 276 aaPredicted RBP18.31■□□□□ 0.52
CLK4-211ENST00000522556 NOL6Q9H6R4 1146 aaKnown RBP18.31■□□□□ 0.52
CLK4-211ENST00000522556 ITM2CQ9NQX7 267 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 WSB2Q9NYS7 404 aaPredicted RBP18.31■□□□□ 0.52
CLK4-211ENST00000522556 GON4LQ3T8J9 2241 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 ADAMTS9Q9P2N4 1935 aa18.31■□□□□ 0.52
CLK4-211ENST00000522556 PLK4O00444 970 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 ZBTB24O43167 697 aaPredicted RBP18.3■□□□□ 0.52
CLK4-211ENST00000522556 ZNF217O75362 1048 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 LRCH4O75427 683 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 ZMPSTE24O75844 475 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 MYBL1P10243 752 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 SRCP12931 536 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 RHOQP17081 205 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 IL1R2P27930 398 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 CD6P30203 668 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 MIPP30301 263 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 PSMD8P48556 350 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 GALCP54803 685 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 ARF5P84085 180 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 GNA12Q03113 381 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 EFHC2Q5JST6 749 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 C6orf118Q5T5N4 469 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 TXNRD3NBQ6F5E7 133 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 CYP2U1Q7Z449 544 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 MMAAQ8IVH4 418 aaKnown RBP18.3■□□□□ 0.52
CLK4-211ENST00000522556 SH2D3CQ8N5H7 860 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 DCAF4L2Q8NA75 395 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 KDM1BQ8NB78 822 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 PIGKQ92643 395 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 KCTD15Q96SI1 283 aaPredicted RBP18.3■□□□□ 0.52
CLK4-211ENST00000522556 SPON2Q9BUD6 331 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 NUP85Q9BW27 656 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 GPR174Q9BXC1 333 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 FSCN3Q9NQT6 498 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 SPTLC3Q9NUV7 552 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 TMEM248Q9NWD8 314 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 SUN2Q9UH99 717 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 SLC25A13Q9UJS0 675 aa18.3■□□□□ 0.52
CLK4-211ENST00000522556 AP4E1Q9UPM8 1137 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms