RNA–Protein interactions for RNA: ENST00000522476.5

NDRG1-222, Transcript of N-myc downstream regulated 1, human

TSL 1 (best) BASIC

Gene NDRG1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-222	ENST00000522476	DNAJB4	Q9UDY4	337 aa		13.52	□□□□□ -0.25
NDRG1-222	ENST00000522476	MFHAS1	Q9Y4C4	1052 aa		13.52	□□□□□ -0.25
NDRG1-222	ENST00000522476	BACE2	Q9Y5Z0	518 aa		13.52	□□□□□ -0.25
NDRG1-222	ENST00000522476		A0A1W2PPM1	405 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	TRIM49D1	C9J1S8	452 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	CACNG3	O60359	315 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	USP1	O94782	785 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	FSBP	O95073	299 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	OAS1	P00973	400 aa	Known RBP	13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	IL1B	P01584	269 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	TROVE2	P10155	538 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	7e-6	■□□□□ 11.1
NDRG1-222	ENST00000522476	HAPLN1	P10915	354 aa	Predicted RBP	13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	RPA3	P35244	121 aa	Predicted RBP	13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	HADHA	P40939	763 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	SLC11A1	P49279	550 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	RABGGTB	P53611	331 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	6e-8	■■■□□ 17.3
NDRG1-222	ENST00000522476	C1orf53	Q5VUE5	145 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	RNF43	Q68DV7	783 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	DNAAF3	Q8N9W5	541 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	NSMCE1	Q8WV22	266 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	PTCD2	Q8WV60	388 aa	Known RBP	13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	CASP10	Q92851	521 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	BTN2A3P	Q96KV6	586 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	FCRL5	Q96RD9	977 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	SIK2	Q9H0K1	926 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	ANLN	Q9NQW6	1124 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	FGFR1OP2	Q9NVK5	253 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	STK39	Q9UEW8	545 aa		13.51	□□□□□ -0.25
NDRG1-222	ENST00000522476	FAM237B	A0A1B0GVD1	139 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	WDR27	A2RRH5	827 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	MTMR11	A4FU01	709 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	TBKBP1	A7MCY6	615 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476		E9PAM4	449 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	KCNK1	O00180	336 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	KLF11	O14901	512 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	TBC1D4	O60343	1298 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	B4GALT3	O60512	393 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	C1QA	P02745	245 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	GALT	P07902	379 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	OR4Q2	P0C623	313 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	MGAT1	P26572	445 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	TUB	P50607	506 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	NEK3	P51956	506 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	SESN2	P58004	480 aa	Predicted RBP	13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	CCDC15	Q0P6D6	951 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	CRYM	Q14894	314 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	USP41	Q3LFD5	358 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	GRTP1	Q5TC63	336 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	AFMID	Q63HM1	303 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	KCTD11	Q693B1	232 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	TRPM8	Q7Z2W7	1104 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	UMODL1-AS1	Q8N2C9	162 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	NPW	Q8N729	165 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	TCP10L	Q8TDR4	215 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	CCT6B	Q92526	530 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	IL12RB2	Q99665	862 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	CPNE1	Q99829	537 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	ZYG11B	Q9C0D3	744 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	HIPK3	Q9H422	1215 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	MARCH5	Q9NX47	278 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	VANGL2	Q9ULK5	521 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	MAFF	Q9ULX9	164 aa		13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	HBS1L	Q9Y450	684 aa	Known RBP	13.5	□□□□□ -0.25
NDRG1-222	ENST00000522476	PTPRD	P23468	1912 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476		I6L893	689 aa	Predicted RBP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	DFFA	O00273	331 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	ZBTB24	O43167	697 aa	Predicted RBP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	EDF1	O60869	148 aa	Known RBP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	EFCAB14	O75071	495 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	DCTN3	O75935	186 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	DHRS4L1	P0CG22	281 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	CCNB1	P14635	433 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	NFKB1	P19838	968 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	CRHR1	P34998	444 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	ALDH7A1	P49419	539 aa	Known RBP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	NIPAL4	Q0D2K0	466 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	IKBKE	Q14164	716 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	SETDB1	Q15047	1291 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	DDR2	Q16832	855 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	INSC	Q1MX18	579 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	LRRC26	Q2I0M4	334 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	SPDYA	Q5MJ70	313 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	C9orf50	Q5SZB4	431 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	SYCP2L	Q5T4T6	812 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	ATG16L1	Q676U5	607 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	CNKSR3	Q6P9H4	555 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	KYAT3	Q6YP21	454 aa	Known RBP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	CCDC91	Q7Z6B0	441 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	CRIPAK	Q8N1N5	446 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	AGGF1	Q8N302	714 aa	eCLIP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	ZNF75CP	Q92670	426 aa	Predicted RBP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	TTLL2	Q9BWV7	592 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	RASSF4	Q9H2L5	321 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	KIF9	Q9HAQ2	790 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	NMUR1	Q9HB89	426 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	ENTPD7	Q9NQZ7	604 aa		13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
NDRG1-222	ENST00000522476	TMEM248	Q9NWD8	314 aa		13.49	□□□□□ -0.25

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