RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GLUD1P00367 558 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 GLUD2P49448 558 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 ANXA11P50995 505 aaKnown RBP16.47■□□□□ 0.23
USP42-207ENST00000521713 DDX39BQ13838 428 aaKnown RBP16.47■□□□□ 0.23
USP42-207ENST00000521713 SH3D19Q5HYK7 790 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 IFNEQ86WN2 208 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 TMEM159Q96B96 161 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 RMND5BQ96G75 393 aaPredicted RBP16.47■□□□□ 0.23
USP42-207ENST00000521713 ZNF333Q96JL9 665 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 BBS2Q9BXC9 721 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 ST6GALNAC4Q9H4F1 302 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 ZNF446Q9NWS9 450 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 TUBGCP4Q9UGJ1 667 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 GSNP06396 782 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 CDC25CP30307 473 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 GP5P40197 560 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 NUMBP49757 651 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 TGM3Q08188 693 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 MAMLD1Q13495 774 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 C9orf57Q5W0N0 161 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 PLEKHM3Q6ZWE6 761 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 RAD54BQ9Y620 910 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 CCDC85CA6NKD9 419 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 TRIM24O15164 1050 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 ASNA1O43681 348 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 FGF19O95750 216 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 TPBGLP0DKB5 382 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 PECAM1P16284 738 aaPredicted RBP16.47■□□□□ 0.23
USP42-207ENST00000521713 PTPN3P26045 913 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 FAM183BPQ6ZVS7 135 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 MREGQ8N565 214 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 DNAJC18Q9H819 358 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 SLC28A3Q9HAS3 691 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 NCKIPSDQ9NZQ3 722 aa16.47■□□□□ 0.23
USP42-207ENST00000521713 ZNF214Q9UL59 606 aaPredicted RBP16.47■□□□□ 0.23
USP42-207ENST00000521713 ZSCAN5CA6NGD5 496 aaPredicted RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 FGBP02675 491 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 RARAP10276 462 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 SMPD1P17405 629 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 PGAM1P18669 254 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 PBLDP30039 288 aaPredicted RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 CDK16Q00536 496 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 PURAQ00577 322 aaKnown RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 TPGS1Q6ZTW0 290 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 RAD18Q9NS91 495 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 SMIM28A0A1B0GU29 152 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 EIF2B2P49770 351 aaKnown RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 PARP6Q2NL67 630 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 SPANXN3Q5MJ09 141 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 PDPK2PQ6A1A2 396 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 FBXL19Q6PCT2 694 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 FAM35AQ86V20 835 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 MON1AQ86VX9 555 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 WDR60Q8WVS4 1066 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 VPS50Q96JG6 964 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 TLR10Q9BXR5 811 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 RBPJLQ9UBG7 517 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 CTNNAL1Q9UBT7 734 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 RIPK2O43353 540 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 CYP1A2P05177 515 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 OCM2P0CE71 109 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 OCMP0CE72 109 aaPredicted RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 SNRPD1P62314 119 aaKnown RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 PHKG1Q16816 387 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 VSTM1Q6UX27 236 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 USP45Q70EL2 814 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 IFNL1Q8IU54 200 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 HJURPQ8NCD3 748 aaPredicted RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 LRRC39Q96DD0 335 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 PANX3Q96QZ0 392 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 DUSP16Q9BY84 665 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 PDZK1P1A8MUH7 402 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 ZW10O43264 779 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 INHAP05111 366 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 OR56A5P0C7T3 313 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 PLCL1Q15111 1095 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 ZBTB49Q6ZSB9 765 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 C16orf59Q7L2K0 433 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 GLT6D1Q7Z4J2 308 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 SLC22A9Q8IVM8 553 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 NR1H4Q96RI1 486 aaPredicted RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 TBL1YQ9BQ87 522 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 CCDC28BQ9BUN5 200 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 ZYG11BQ9C0D3 744 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 ARHGAP28Q9P2N2 729 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 DAPK2Q9UIK4 370 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 SNX13Q9Y5W8 968 aa16.46■□□□□ 0.23
USP42-207ENST00000521713 XRN1Q8IZH2 1706 aaKnown RBP16.46■□□□□ 0.23
USP42-207ENST00000521713 EPB42P16452 691 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 OR1D2P34982 312 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 ARL2P36404 184 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 AQP5P55064 265 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 C21orf59P57076 290 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 XRCC4Q13426 336 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 C16orf72Q14CZ0 275 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 ECM1Q16610 540 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 MIIPQ5JXC2 388 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 RABGEF1Q9UJ41 708 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 RAP1GAP2Q684P5 730 aa16.45■□□□□ 0.22
USP42-207ENST00000521713 IYDQ6PHW0 289 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms