RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 HAUS4Q9H6D7 363 aa18.37■□□□□ 0.53
TRAPPC9-211ENST00000521700 VPS28Q9UK41 221 aa18.37■□□□□ 0.53
TRAPPC9-211ENST00000521700 SLC6A14Q9UN76 642 aa18.37■□□□□ 0.53
TRAPPC9-211ENST00000521700 DOCK4Q8N1I0 1966 aa18.37■□□□□ 0.53
TRAPPC9-211ENST00000521700 RNASEH1O60930 286 aaKnown RBP18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 CFIP05156 583 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 RHOCP08134 193 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 SERPINF2P08697 491 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 VAV1P15498 845 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 RRM1P23921 792 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 PBX1P40424 430 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 PRKCIP41743 596 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 RPL7AP62424 266 aaKnown RBP18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 ARL13BQ3SXY8 428 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 FIGNQ5HY92 759 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 WDR45BQ5MNZ6 344 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 PPP1R15BQ5SWA1 713 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 DCAF12L1Q5VU92 463 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 DNAJC24Q6P3W2 148 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 ZNF571Q7Z3V5 609 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 TFAP2DQ7Z6R9 452 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 SETD3Q86TU7 594 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 MMAAQ8IVH4 418 aaKnown RBP18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 STK40Q8N2I9 435 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 FAM172AQ8WUF8 416 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 PSMB7Q99436 277 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 ZYG11BQ9C0D3 744 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 MUC3BQ9H195 1237 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 OSBPL2Q9H1P3 480 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 PABPC3Q9H361 631 aaKnown RBP18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 TMEM9BQ9NQ34 198 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 FSCN3Q9NQT6 498 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 ZNF212Q9UDV6 495 aa18.36■□□□□ 0.53
TRAPPC9-211ENST00000521700 A0A0D9SEW6 157 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 MED19A0JLT2 244 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 MEI4A8MW99 385 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 TMCO5BA8MYB1 307 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 GOLGA6L19H0YKK7 550 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 ATP9BO43861 1147 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 ENGP17813 658 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 OR1E1P30953 314 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 UBASH3AP57075 661 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 CST6Q15828 149 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 TTC31Q49AM3 519 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 CCDC185Q8N715 623 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 VCPIP1Q96JH7 1222 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 C6orf106Q9H6K1 298 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 CAPN10Q9HC96 672 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 FBXL12Q9NXK8 326 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 PPARGC1AQ9UBK2 798 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 OR12D3Q9UGF7 316 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 SLC25A13Q9UJS0 675 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 SCML1Q9UN30 329 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 ADAMTS9Q9P2N4 1935 aa18.35■□□□□ 0.53
TRAPPC9-211ENST00000521700 FAM72CH0Y354 149 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 MID1O15344 667 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 CCP110O43303 1012 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 SNAP91O60641 907 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 MT-CO1P00395 513 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 SKILP12757 684 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 SLC8A1P32418 973 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 ZNF143P52747 638 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 NRG1Q02297 640 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 KLHL30Q0D2K2 578 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 DLG2Q15700 870 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 ACCSLQ4AC99 568 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 C6orf118Q5T5N4 469 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 FAM72AQ5TYM5 149 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 MANEALQ5VSG8 457 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 FAM72DQ6L9T8 149 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 USP30Q70CQ3 517 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 RABEPKQ7Z6M1 372 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 FAM72BQ86X60 149 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 DNAAF5Q86Y56 855 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 SH2D3CQ8N5H7 860 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 MCEEQ96PE7 176 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 PCED1AQ9H1Q7 454 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 SGK2Q9HBY8 427 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 SERGEFQ9UGK8 458 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 NCKAP1Q9Y2A7 1128 aa18.34■□□□□ 0.53
TRAPPC9-211ENST00000521700 NYNRINQ9P2P1 1898 aaKnown RBP18.33■□□□□ 0.53
TRAPPC9-211ENST00000521700 ILVBLA1L0T0 632 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 ANKRD62A6NC57 917 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 DDX3XO00571 662 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 SEMA4FO95754 770 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 SRCP12931 536 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 GNSP15586 552 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 MAPK8P45983 427 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 KRT83P78385 493 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 GFPT1Q06210 699 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 ELAVL3Q14576 367 aaKnown RBP18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 PPM1JQ5JR12 505 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 PPP1R2P3Q6NXS1 205 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 DCUN1D2Q6PH85 259 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 OR7D4Q8NG98 312 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 GANCQ8TET4 914 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 NTAN1Q96AB6 310 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 CNPY3Q9BT09 278 aa18.33■□□□□ 0.52
TRAPPC9-211ENST00000521700 C2orf49Q9BVC5 232 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms