RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 M0QYT0 321 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 ATP9BO43861 1147 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 PAGE1O75459 146 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 CD38P28907 300 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 GGCXP38435 758 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 ZNF177Q13360 481 aaPredicted RBP20.21■□□□□ 0.83
PABPC1-215ENST00000520804 INAVAQ3KP66 663 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 C5orf22Q49AR2 442 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 VWA3BQ502W6 1294 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 OTUD1Q5VV17 481 aaPredicted RBP20.21■□□□□ 0.83
PABPC1-215ENST00000520804 DPY19L2P1Q6NXN4 242 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.21■□□□□ 0.83
PABPC1-215ENST00000520804 C14orf80Q86SX3 495 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 ZDHHC17Q8IUH5 632 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 FAM114A1Q8IWE2 563 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 FAM131CQ96AQ9 280 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 ELF4Q99607 663 aaPredicted RBP20.21■□□□□ 0.83
PABPC1-215ENST00000520804 NDST4Q9H3R1 872 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 PLCB1Q9NQ66 1216 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 AASDHPPTQ9NRN7 309 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 RRN3Q9NYV6 651 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 SLC25A13Q9UJS0 675 aa20.21■□□□□ 0.83
PABPC1-215ENST00000520804 WNT9AO14904 365 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 CLDN11O75508 207 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 METAP1P53582 386 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 BPIFB4P59827 614 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 DSG4Q86SJ6 1040 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 OR8D1Q8WZ84 308 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 NPY6RQ99463 290 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 CCDC86Q9H6F5 360 aaKnown RBP20.2■□□□□ 0.82
PABPC1-215ENST00000520804 PIGVQ9NUD9 493 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D30Q9Y2I9 924 aa20.2■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3DA0A087WVF3 549 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3IA0A087WXS9 549 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3EA0A087X179 549 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3KA0A087X1G2 549 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3FA6NER0 549 aaPredicted RBP20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3LB9A6J9 549 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 SLC7A4O43246 635 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 LATO43561 262 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3HP0C7X1 549 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 CDH4P55283 916 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 PPP2CBP62714 309 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 PPP2CAP67775 309 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 ACCSLQ4AC99 568 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 MIIPQ5JXC2 388 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 BRMS1LQ5PSV4 323 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 PRAMEF14Q5SWL7 426 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 FAM46CQ5VWP2 391 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3GQ6DHY5 549 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3CQ6IPX1 549 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TBC1D3Q8IZP1 549 aaPredicted RBP20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TMEM35BQ8NCS4 154 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 SERAC1Q96JX3 654 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TUBGCP2Q9BSJ2 902 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 TKTL2Q9H0I9 626 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 SIK2Q9H0K1 926 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 KDM4CQ9H3R0 1056 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 CLSTN2Q9H4D0 955 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 ANLNQ9NQW6 1124 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 ARHGEF38Q9NXL2 777 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.19■□□□□ 0.82
PABPC1-215ENST00000520804 VPS28Q9UK41 221 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 SARDHQ9UL12 918 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 PPM1HQ9ULR3 514 aa20.19■□□□□ 0.82
PABPC1-215ENST00000520804 DMXL2Q8TDJ6 3036 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 PLK4O00444 970 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 ADCY5O95622 1261 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 PRKCSHP14314 528 aaPredicted RBP20.18■□□□□ 0.82
PABPC1-215ENST00000520804 TFE3P19532 575 aaPredicted RBP20.18■□□□□ 0.82
PABPC1-215ENST00000520804 CDH5P33151 784 aaPredicted RBP20.18■□□□□ 0.82
PABPC1-215ENST00000520804 CXCR3P49682 368 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 DRAP1Q14919 205 aaPredicted RBP20.18■□□□□ 0.82
PABPC1-215ENST00000520804 SHBQ15464 509 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 DLG2Q15700 870 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 DPCR1Q3MIW9 517 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 SLC45A4Q5BKX6 768 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 GATAD2AQ86YP4 633 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 GALNT15Q8N3T1 639 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 SH2D3CQ8N5H7 860 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 NT5C3BQ969T7 300 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 PGAP3Q96FM1 320 aaPredicted RBP20.18■□□□□ 0.82
PABPC1-215ENST00000520804 PDCL3Q9H2J4 239 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 WDCPQ9H6R7 721 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 GDF3Q9NR23 364 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 FTSJ1Q9UET6 329 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 STAP1Q9ULZ2 295 aa20.18■□□□□ 0.82
PABPC1-215ENST00000520804 COL5A1P20908 1838 aaPredicted RBP20.18■□□□□ 0.82
PABPC1-215ENST00000520804 FAM208BQ5VWN6 2430 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 C1QTNF3-AMACRE9PGA6 284 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 I6L893 689 aaPredicted RBP20.17■□□□□ 0.82
PABPC1-215ENST00000520804 TLR4O00206 839 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 MCF2LO15068 1137 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 ALOX15BO15296 676 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 PLRG1O43660 514 aaKnown RBP20.17■□□□□ 0.82
PABPC1-215ENST00000520804 RTN2O75298 545 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 CNTN5O94779 1100 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 CYP11B1P15538 503 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 ERCC5P28715 1186 aaPredicted RBP20.17■□□□□ 0.82
PABPC1-215ENST00000520804 GABRB2P47870 512 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms