RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 DGCR2P98153 550 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 AP5B1Q2VPB7 878 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 TMEM63BQ5T3F8 832 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 ZNF280DQ6N043 979 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 NAPRTQ6XQN6 538 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 BCDIN3DQ7Z5W3 292 aaKnown RBP8.01□□□□□ -1.13
LSM1-202ENST00000520286 CNTROBQ8N137 903 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 CXorf38Q8TB03 319 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 ACTRT2Q8TDY3 377 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 CNOT9Q92600 299 aaKnown RBP8.01□□□□□ -1.13
LSM1-202ENST00000520286 ZNF845Q96IR2 970 aaPredicted RBP8.01□□□□□ -1.13
LSM1-202ENST00000520286 LBHD1Q9BQE6 289 aaPredicted RBP8.01□□□□□ -1.13
LSM1-202ENST00000520286 GAR1Q9NY12 217 aaKnown RBP8.01□□□□□ -1.13
LSM1-202ENST00000520286 ST3GAL5Q9UNP4 418 aa8.01□□□□□ -1.13
LSM1-202ENST00000520286 PLB1Q6P1J6 1458 aa8□□□□□ -1.13
LSM1-202ENST00000520286 KAT6AQ92794 2004 aa8□□□□□ -1.13
LSM1-202ENST00000520286 ERICH3Q5RHP9 1530 aa8□□□□□ -1.13
LSM1-202ENST00000520286 NPIPB15A6NHN6 443 aaPredicted RBP8□□□□□ -1.13
LSM1-202ENST00000520286 ORC4O43929 436 aa8□□□□□ -1.13
LSM1-202ENST00000520286 EXOC3O60645 756 aa8□□□□□ -1.13
LSM1-202ENST00000520286 CNTN5O94779 1100 aa8□□□□□ -1.13
LSM1-202ENST00000520286 MLYCDO95822 493 aa8□□□□□ -1.13
LSM1-202ENST00000520286 MT-CO3P00414 261 aa8□□□□□ -1.13
LSM1-202ENST00000520286 ELFN1P0C7U0 828 aa8□□□□□ -1.13
LSM1-202ENST00000520286 GSTM2P28161 218 aa8□□□□□ -1.13
LSM1-202ENST00000520286 ARL1P40616 181 aaPredicted RBP8□□□□□ -1.13
LSM1-202ENST00000520286 KLHL24Q6TFL4 600 aa8□□□□□ -1.13
LSM1-202ENST00000520286 GALNT5Q7Z7M9 940 aa8□□□□□ -1.13
LSM1-202ENST00000520286 TMEM200AQ86VY9 491 aa8□□□□□ -1.13
LSM1-202ENST00000520286 TERB1Q8NA31 727 aa8□□□□□ -1.13
LSM1-202ENST00000520286 C2CD4CQ8TF44 421 aa8□□□□□ -1.13
LSM1-202ENST00000520286 RAB40AQ8WXH6 277 aa8□□□□□ -1.13
LSM1-202ENST00000520286 C20orf173Q96LM9 149 aa8□□□□□ -1.13
LSM1-202ENST00000520286 EPHX3Q9H6B9 360 aa8□□□□□ -1.13
LSM1-202ENST00000520286 PCDHB16Q9NRJ7 776 aa8□□□□□ -1.13
LSM1-202ENST00000520286 PKP3Q9Y446 797 aa8□□□□□ -1.13
LSM1-202ENST00000520286 HEMK1Q9Y5R4 338 aaPredicted RBP8□□□□□ -1.13
LSM1-202ENST00000520286 GTPBP1O00178 669 aaKnown RBP7.99□□□□□ -1.13
LSM1-202ENST00000520286 ADH4P08319 380 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 COX7A2P14406 83 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 ZNF20P17024 532 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 HOXB9P17482 250 aaPredicted RBP7.99□□□□□ -1.13
LSM1-202ENST00000520286 ABCD1P33897 745 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 MTNR1AP48039 350 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 OAZ1P54368 228 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 CYP4F2P78329 520 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 CUL4AQ13619 759 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 IL13RA2Q14627 380 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 NAPEPLDQ6IQ20 393 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 GJB7Q6PEY0 223 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 RNF144BQ7Z419 303 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 ZNF804AQ7Z570 1209 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 ATP2A3Q93084 1043 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 SAAL1Q96ER3 474 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 MACROD1Q9BQ69 325 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 ABHD14AQ9BUJ0 271 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 KRTAP3-1Q9BYR8 98 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 TRIM2Q9C040 744 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 ANKEF1Q9NU02 776 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 SEPT11Q9NVA2 429 aaKnown RBP7.99□□□□□ -1.13
LSM1-202ENST00000520286 ASIC5Q9NY37 505 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 HDAC6Q9UBN7 1215 aa7.99□□□□□ -1.13
LSM1-202ENST00000520286 SIRT4Q9Y6E7 314 aaPredicted RBP7.99□□□□□ -1.13
LSM1-202ENST00000520286 KIAA0586Q9BVV6 1533 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 GLI2P10070 1586 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 TGFB1I1O43294 461 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 CCNDBP1O95273 360 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 SPARCP09486 303 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 RFPL3SP0C7P2 107 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 ATF7P17544 494 aaPredicted RBP7.98□□□□□ -1.13
LSM1-202ENST00000520286 GJC1P36383 396 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 MPLP40238 635 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 ZNF84P51523 738 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 RARSP54136 660 aaKnown RBP7.98□□□□□ -1.13
LSM1-202ENST00000520286 ADPRHP54922 357 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 DMWDQ09019 674 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 KCNB1Q14721 858 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 GLE1Q53GS7 698 aaKnown RBP7.98□□□□□ -1.13
LSM1-202ENST00000520286 TMEM65Q6PI78 240 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 DCDC5Q6ZRR9 648 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 ENOSF1Q7L5Y1 443 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 LINC00476Q8WZB0 136 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 TBC1D5Q92609 795 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 USP6NLQ92738 828 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 CAVIN3Q969G5 261 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 COQ10AQ96MF6 247 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 C1QTNF3Q9BXJ4 246 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 SYBUQ9NX95 663 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 MPP6Q9NZW5 540 aa7.98□□□□□ -1.13
LSM1-202ENST00000520286 MCIDASD6RGH6 385 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 GCOM1H8Y6P7 765 aaPredicted RBP7.97□□□□□ -1.13
LSM1-202ENST00000520286 HBP1O60381 514 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 SGPL1O95470 568 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 ESRRBO95718 433 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 CHRM4P08173 479 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 DRD4P21917 467 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 TGM2P21980 687 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 BSGP35613 385 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 AVPR1BP47901 424 aa7.97□□□□□ -1.13
LSM1-202ENST00000520286 EFNB1P98172 346 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms