RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 VIMP08670 466 aaKnown RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 CSH1P0DML2 217 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 CSH2P0DML3 217 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 GBP2P32456 591 aaPredicted RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 KPNA1P52294 538 aaPredicted RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 WDR5P61964 334 aaKnown RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 BTG3Q14201 252 aaPredicted RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 PRPSAP1Q14558 356 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 ACBD5Q5T8D3 534 aaPredicted RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 TTC39BQ5VTQ0 682 aaPredicted RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 SNX30Q5VWJ9 437 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 RAP1GAP2Q684P5 730 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 TIGD7Q6NT04 549 aaPredicted RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 FBXL22Q6P050 247 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 OTOP3Q7RTS5 596 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 KLHDC8BQ8IXV7 354 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 PRDM4Q9UKN5 801 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 NYNRINQ9P2P1 1898 aaKnown RBP18.87■□□□□ 0.61
FAM49B-214ENST00000519540 DOCK4Q8N1I0 1966 aa18.87■□□□□ 0.61
FAM49B-214ENST00000519540 DRGXA6NNA5 263 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 UGT1A9O60656 530 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 NDST2P52849 883 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 IL9RQ01113 521 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 ALFQ53S48 1182 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 TPGS2Q68CL5 300 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 TFAP2DQ7Z6R9 452 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 CMTR2Q8IYT2 770 aaKnown RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 BANPQ8N9N5 519 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 OVCA2Q8WZ82 227 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 IGSF8Q969P0 613 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 TTC17Q96AE7 1141 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 ALKBH8Q96BT7 664 aaKnown RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 ZNF419Q96HQ0 510 aaPredicted RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 SERAC1Q96JX3 654 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 MAGEB18Q96M61 343 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 CDK5RAP1Q96SZ6 601 aaKnown RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 HERC2P3Q9BVR0 1158 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 UGT1A7Q9HAW7 530 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 UGT1A10Q9HAW8 530 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 UGT1A8Q9HAW9 530 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 TCP11X1B4DZS4 312 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 GOLGA8RI6L899 631 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 KIAA0355O15063 1070 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 PSMD3O43242 534 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 KRT37O76014 449 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 HMGA1P17096 107 aaKnown RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 ATP5C1P36542 298 aaKnown RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 CRYMQ14894 314 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 LGSNQ5TDP6 509 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 GKAP1Q5VSY0 366 aaPredicted RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 SH2D5Q6ZV89 423 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 UNC5BQ8IZJ1 945 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 DNAAF3Q8N9W5 541 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 PDZD8Q8NEN9 1154 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 SEC16BQ96JE7 1060 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 ZNF512Q96ME7 567 aaPredicted RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 KLF6Q99612 283 aaPredicted RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 LRRC40Q9H9A6 602 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 DONSONQ9NYP3 566 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 SPG21Q9NZD8 308 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 UBP1Q9NZI7 540 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 BFARQ9NZS9 450 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 IPO11Q9UI26 975 aaKnown RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 DNMT3LQ9UJW3 386 aa18.86■□□□□ 0.61
FAM49B-214ENST00000519540 HBS1LQ9Y450 684 aaKnown RBP18.86■□□□□ 0.61
FAM49B-214ENST00000519540 ZNF840PA6NDX5 716 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 EFCAB14O75071 495 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 SNRPAP09012 282 aaKnown RBP18.85■□□□□ 0.61
FAM49B-214ENST00000519540 LAG3P18627 525 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 MTA1Q13330 715 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 SLC1A5Q15758 541 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 PIGWQ7Z7B1 504 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 SPATS2Q86XZ4 545 aaKnown RBP18.85■□□□□ 0.61
FAM49B-214ENST00000519540 FCRL5Q96RD9 977 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 PAIP2Q9BPZ3 127 aaKnown RBP18.85■□□□□ 0.61
FAM49B-214ENST00000519540 CYP4F11Q9HBI6 524 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 GLOD4Q9HC38 313 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 SAMD15Q9P1V8 674 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 GGA2Q9UJY4 613 aa18.85■□□□□ 0.61
FAM49B-214ENST00000519540 AAR2Q9Y312 384 aaKnown RBP18.85■□□□□ 0.61
FAM49B-214ENST00000519540 TRIM49D1C9J1S8 452 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 ZWINTO95229 277 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 POLBP06746 335 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 RAG1P15918 1043 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 NPY2RP49146 381 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 KCNQ1P51787 676 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 SLC18A2Q05940 514 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 NADSYN1Q6IA69 706 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 DDX53Q86TM3 631 aaKnown RBP18.84■□□□□ 0.61
FAM49B-214ENST00000519540 RBM22Q9NW64 420 aaKnown RBP eCLIP18.84■□□□□ 0.61
FAM49B-214ENST00000519540 ZNF212Q9UDV6 495 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 GOLGA6L7A0A1B0GV03 622 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 ACRP10323 421 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 FOXN2P32314 431 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 NIPAL4Q0D2K0 466 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 RAB33AQ14088 237 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 NAPEPLDQ6IQ20 393 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.84■□□□□ 0.61
FAM49B-214ENST00000519540 SPATA22Q8NHS9 363 aa18.84■□□□□ 0.61
FAM49B-214ENST00000519540 MYRFLQ96LU7 910 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms