RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TDRD10Q5VZ19 366 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3GQ6DHY5 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 OR6B2Q6IFH4 312 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3CQ6IPX1 549 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 C16orf46Q6P387 395 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 LIMS2Q7Z4I7 341 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 SLITRK4Q8IW52 837 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TBC1D3Q8IZP1 549 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 NAGSQ8N159 534 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 GTF3C6Q969F1 213 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 FBXO32Q969P5 355 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 CCDC74AQ96AQ1 378 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 GFM1Q96RP9 751 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 CALN1Q9BXU9 219 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 ZNF518BQ9C0D4 1074 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 CHMP4BQ9H444 224 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 GPR27Q9NS67 375 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 ASF1BQ9NVP2 202 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 DNAJC28Q9NX36 388 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 DPP3Q9NY33 737 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 IL37Q9NZH6 218 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 CPSF3Q9UKF6 684 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 ADAM21Q9UKJ8 722 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 NUDT5Q9UKK9 219 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 PADI4Q9UM07 663 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 NEU2Q9Y3R4 380 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 B3GALT1Q9Y5Z6 326 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 TGP01266 2768 aa7.06□□□□□ -1.28
CTNNA1-216ENST00000519489 NOTCH1P46531 2555 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 FAM221AA4D161 298 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 VWA3AA6NCI4 1184 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 ANKUB1A6NFN9 424 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 NEMP2A6NFY4 417 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 CLDN5O00501 218 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 SLC31A1O15431 190 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 GRID2O43424 1007 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 TLR5O60602 858 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 RAD1O60671 282 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 MAGEC1O60732 1142 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 STC2O76061 302 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 SIX3O95343 332 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 THBS1P07996 1170 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 FGF3P11487 239 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 GOT1P17174 413 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 PTPN1P18031 435 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 GUCY2CP25092 1073 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 YWHAQP27348 245 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 MAP2K3P46734 347 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 TUBP50607 506 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 SFSWAPQ12872 951 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 FOXD4Q12950 439 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 C1orf61Q13536 156 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 SEPT6Q14141 434 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 TMEM132DQ14C87 1099 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 JMJD6Q6NYC1 403 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 SLC39A4Q6P5W5 647 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 GCNT7Q6ZNI0 430 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 ZNF438Q7Z4V0 828 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 KIAA0907Q7Z7F0 614 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 NEK8Q86SG6 692 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 RBFAQ8N0V3 343 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 TMEM161BQ8NDZ6 487 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 CCDC148Q8NFR7 591 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 WDR48Q8TAF3 677 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 WFDC5Q8TCV5 224 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 STARD8Q92502 1023 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 GOLGA1Q92805 767 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 KIFAP3Q92845 792 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 SNRNP40Q96DI7 357 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 MRGPRX3Q96LB0 322 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 CEP295NLQ96MC4 621 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 SLITRK1Q96PX8 696 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 KCNK16Q96T55 309 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 OMDQ99983 421 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 SYT15Q9BQS2 421 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 CPEB1Q9BZB8 566 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 C22orf23Q9BZE7 217 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 RUBCNLQ9H714 662 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 FBRSQ9HAH7 460 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 DOLKQ9UPQ8 538 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 PCDHGB6Q9Y5F9 930 aa7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 TNRC6AQ8NDV7 1962 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 TDRD6O60522 2096 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-216ENST00000519489 FAM92AA1XBS5 289 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 ARHGEF35A5YM69 484 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PRAMEF26H0Y7S4 382 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 AQP9O43315 295 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 XPOTO43592 962 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 TIMM44O43615 452 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 HIP1RO75146 1068 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 MAP3K6O95382 1288 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 CSF2P04141 144 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PDGFRBP09619 1106 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 MAPTP10636 758 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 NME1P15531 152 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 CDC25AP30304 524 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 TRAPPC10P48553 1259 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PSMD8P48556 350 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms