RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 DSCR9P59020 149 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 RHAGQ02094 409 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 PMPCAQ10713 525 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 HDAC1Q13547 482 aaPredicted RBP4.31□□□□□ -1.72
LINC01088-211ENST00000515597 BTBD16Q32M84 506 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 ENTPD8Q5MY95 495 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 WASHC2DQ5SRD0 308 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 XRRA1Q6P2D8 792 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 ZNF329Q86UD4 541 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 SVIPQ8NHG7 77 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 CLEC4CQ8WTT0 213 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 IP6K1Q92551 441 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 TMEM120AQ9BXJ8 343 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 ISCUQ9H1K1 167 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 PLSCR4Q9NRQ2 329 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 LIN7CQ9NUP9 197 aaKnown RBP4.31□□□□□ -1.72
LINC01088-211ENST00000515597 PLK2Q9NYY3 685 aa4.31□□□□□ -1.72
LINC01088-211ENST00000515597 TNFRSF6BO95407 300 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 IFIT2P09913 472 aaKnown RBP4.3□□□□□ -1.72
LINC01088-211ENST00000515597 CPA1P15085 419 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 CHRNA5P30532 468 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 GAS1P54826 345 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 RPL36AP83881 106 aaKnown RBP4.3□□□□□ -1.72
LINC01088-211ENST00000515597 MAP9Q49MG5 647 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 ALG10Q5BKT4 473 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 ALG10BQ5I7T1 473 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 PRAMEF19Q5SWL8 479 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 C9orf50Q5SZB4 431 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 GFI1BQ5VTD9 330 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 Q6ZTK2 550 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 KLBQ86Z14 1044 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 OR1N1Q8NGS0 311 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 LMO3Q8TAP4 145 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 WFIKKN2Q8TEU8 576 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 HMGB4Q8WW32 186 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 NR4A3Q92570 626 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 URB1-AS1Q96HZ7 61 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 KATNAL1Q9BW62 490 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 SORBS1Q9BX66 1292 aaKnown RBP4.3□□□□□ -1.72
LINC01088-211ENST00000515597 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.3□□□□□ -1.72
LINC01088-211ENST00000515597 PNRC2Q9NPJ4 139 aaKnown RBP4.3□□□□□ -1.72
LINC01088-211ENST00000515597 HIF1ANQ9NWT6 349 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 TBC1D14Q9P2M4 693 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 WNT16Q9UBV4 365 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 LZTS1Q9Y250 596 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 PKP3Q9Y446 797 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 KIF26BQ2KJY2 2108 aa4.3□□□□□ -1.72
LINC01088-211ENST00000515597 A0A1B0GVT2 93 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 LGALS16A8MUM7 142 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 EFCAB8A8MWE9 144 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 CAMTA2O94983 1202 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 SLC16A2P36021 539 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 KCNJ4P48050 445 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 PCYT1AP49585 367 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 RCAN1P53805 252 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 ZBTB16Q05516 673 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 RNASELQ05823 741 aaKnown RBP4.29□□□□□ -1.72
LINC01088-211ENST00000515597 IZUMO4Q1ZYL8 232 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 TBRG1Q3YBR2 411 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 VWA5B1Q5TIE3 1220 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 SLC25A41Q8N5S1 370 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 ENDOVQ8N8Q3 282 aaKnown RBP4.29□□□□□ -1.72
LINC01088-211ENST00000515597 ZNF527Q8NB42 609 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 KDM1BQ8NB78 822 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 SLC2A12Q8TD20 617 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 PHF21BQ96EK2 531 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 RTKNQ9BST9 563 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 SEZ6LQ9BYH1 1024 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 FRMD8Q9BZ67 464 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-211ENST00000515597 DCLK3Q9C098 648 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 ZNF700Q9H0M5 742 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 MAGEH1Q9H213 219 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 PLAC1Q9HBJ0 212 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 ZNF304Q9HCX3 659 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 OBP2BQ9NPH6 170 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 KRCC1Q9NPI7 259 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-211ENST00000515597 CHST12Q9NRB3 414 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 FBXO4Q9UKT5 387 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 MAGED2Q9UNF1 606 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-211ENST00000515597 PTGDR2Q9Y5Y4 395 aa4.29□□□□□ -1.72
LINC01088-211ENST00000515597 A0A087WV62 115 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 TRBV5-7A0A0A0MS05 114 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 BECN2A8MW95 431 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 INAFM1C9JVW0 142 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 SYT5O00445 386 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 GRID2O43424 1007 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 ITGA2BP08514 1039 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 ROR2Q01974 943 aaKnown RBP4.28□□□□□ -1.72
LINC01088-211ENST00000515597 ARL13AQ5H913 290 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-211ENST00000515597 TTC22Q5TAA0 569 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 ATPAF1Q5TC12 328 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-211ENST00000515597 NFRKBQ6P4R8 1299 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 AAGABQ6PD74 315 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 TOGARAM2Q6ZUX3 1019 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 TMEM200AQ86VY9 491 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 FAM185AQ8N0U4 392 aa4.28□□□□□ -1.72
LINC01088-211ENST00000515597 FAM110DQ8TAY7 271 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-211ENST00000515597 ZNF419Q96HQ0 510 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-211ENST00000515597 WDR12Q9GZL7 423 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms