RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 RBM44Q6ZP01 1051 aaKnown RBP4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 PPP1R42Q7Z4L9 355 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 KCTD20Q7Z5Y7 419 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 ZBTB46Q86UZ6 589 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 DENND1CQ8IV53 801 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 ZNF34Q8IZ26 560 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 CNBD1Q8NA66 436 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 PRPF38AQ8NAV1 312 aaKnown RBP4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 KAT2BQ92831 832 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 ZNF668Q96K58 619 aaPredicted RBP4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 HIST1H2AAQ96QV6 131 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 NYXQ9GZU5 481 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 CHMP4BQ9H444 224 aaKnown RBP4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 PLSCR4Q9NRQ2 329 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 C9orf78Q9NZ63 289 aaPredicted RBP4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 LRRFIP2Q9Y608 721 aaKnown RBP4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 MAST2Q6P0Q8 1798 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 TIAM2Q8IVF5 1701 aa4.03□□□□□ -1.76
ATP2C1-220ENST00000513636 A0A1W2PPC1 479 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 RPS10-NUDT3A0A1W2PQS6 291 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 SERINC4A6NH21 518 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 TTC34A8MYJ7 566 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 H0YGN5 161 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 TNFRSF13BO14836 293 aaPredicted RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 NPHP1O15259 732 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 PCCAP05165 728 aaPredicted RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 ACAA1P09110 424 aaPredicted RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 MMP10P09238 476 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 PARP1P09874 1014 aaKnown RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 NBPF7P0C2Y1 421 aaPredicted RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 HOXB2P14652 356 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 ST6GAL1P15907 406 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 NCLP19338 710 aaKnown RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 KLRC1P26715 233 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 HTR1BP28222 390 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 HOXA7P31268 230 aaPredicted RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 ARHGEF7Q14155 803 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 DLGAP5Q15398 846 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 CNGA3Q16281 694 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 ATAT1Q5SQI0 421 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 PRR5LQ6MZQ0 368 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 CLEC9AQ6UXN8 241 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 NBPF5PQ86XG9 351 aaPredicted RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 IGFBPL1Q8WX77 278 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 CENPIQ92674 756 aaPredicted RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 KAZALD1Q96I82 304 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 SUCLG2Q96I99 432 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 NUP88Q99567 741 aaPredicted RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 HTATIP2Q9BUP3 242 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 UTP14AQ9BVJ6 771 aaKnown RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 USP44Q9H0E7 712 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 BICC1Q9H694 974 aaKnown RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 TRMT112Q9UI30 125 aaKnown RBP4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 ANKRD6Q9Y2G4 727 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 SCN9AQ15858 1988 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 DUOX1Q9NRD9 1551 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 RTL9Q8NET4 1388 aa4.02□□□□□ -1.77
ATP2C1-220ENST00000513636 CDK5RAP2Q96SN8 1893 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 TRBV5-3A0A0A0MS03 114 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 CA12O43570 354 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 RRP9O43818 475 aaKnown RBP4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 PRAMEF2O60811 474 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 HMMRO75330 724 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 ZNF432O94892 652 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 SERPINB2P05120 415 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 TMEM225BP0DP42 221 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 YY1P25490 414 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 GALNSP34059 522 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 VPS41P49754 854 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 SLC29A2Q14542 456 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 IZUMO4Q1ZYL8 232 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 RABL6Q3YEC7 729 aaPredicted RBP4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 SUSD4Q5VX71 490 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 ZNF329Q86UD4 541 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 ANKRD44Q8N8A2 993 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 ELP5Q8TE02 316 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 SEZ6LQ9BYH1 1024 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 C6orf106Q9H6K1 298 aaPredicted RBP4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 MOV10Q9HCE1 1003 aaKnown RBP4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 CD93Q9NPY3 652 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 THSD1Q9NS62 852 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 AGO2Q9UKV8 859 aaKnown RBP4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 MYO6Q9UM54 1294 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 ZNF609O15014 1411 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 MYH2Q9UKX2 1941 aa4.01□□□□□ -1.77
ATP2C1-220ENST00000513636 ECM29Q5VYK3 1845 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 MYH8P13535 1937 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 PNMA6EA0A0J9YXQ4 647 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 AQP7P3A6NL99 342 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 PYCARD-AS1I3L0S3 204 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 TMIGD3P0DMS9 266 aaPredicted RBP4□□□□□ -1.77
ATP2C1-220ENST00000513636 TPH1P17752 444 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 TM4SF1P30408 202 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 SLC7A1P30825 629 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 HOXA11P31270 313 aaPredicted RBP4□□□□□ -1.77
ATP2C1-220ENST00000513636 CCDC152Q4G0S7 254 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 WASHC2DQ5SRD0 308 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 NUGGCQ68CJ6 796 aa4□□□□□ -1.77
ATP2C1-220ENST00000513636 FSTL5Q8N475 847 aaPredicted RBP4□□□□□ -1.77
ATP2C1-220ENST00000513636 METTL25Q8N6Q8 603 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms