RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 AKT2P31751 481 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 MLLT3P42568 568 aaPredicted RBP12.96□□□□□ -0.33
DDX41-215ENST00000512431 SKOR1P84550 965 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 ENPEPQ07075 957 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 CCDC15Q0P6D6 951 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 ACCSLQ4AC99 568 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 DCAF6Q58WW2 860 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 MS4A13Q5J8X5 152 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 NADSYN1Q6IA69 706 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 SHC4Q6S5L8 630 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 USP53Q70EK8 1073 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 FAM186BQ8IYM0 893 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 APCDD1Q8J025 514 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 KIAA0895Q8NCT3 520 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 UBA3Q8TBC4 463 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 IRGQQ8WZA9 623 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 FAM131CQ96AQ9 280 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 IFT43Q96FT9 208 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.33
DDX41-215ENST00000512431 PPP1R9BQ96SB3 815 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 MYOCQ99972 504 aa12.96□□□□□ -0.33
DDX41-215ENST00000512431 CPED1A4D0V7 1026 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 K7ESM1 405 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 TERTO14746 1132 aaKnown RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 TNFSF15O95150 251 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 GIMD1P0DJR0 217 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 TGM2P21980 687 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 NR2F2P24468 414 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 RPL13P26373 211 aaKnown RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 GTF2H1P32780 548 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 PSMC2P35998 433 aaKnown RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 STK19P49842 368 aaPredicted RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 METAP1P53582 386 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 HNRNPKP61978 463 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX41-215ENST00000512431 CNTN1Q12860 1018 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 CLN3Q13286 438 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 CUL4AQ13619 759 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 ZCCHC8Q6NZY4 707 aaKnown RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 NEK5Q6P3R8 708 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 RBM44Q6ZP01 1051 aaKnown RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 DCP2Q8IU60 420 aaKnown RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 EXD3Q8N9H8 876 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 FBXL13Q8NEE6 735 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 WDR36Q8NI36 951 aaKnown RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 FAM174AQ8TBP5 190 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 RNF34Q969K3 372 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 SERPINB11Q96P15 392 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 NUCKS1Q9H1E3 243 aaKnown RBP12.95□□□□□ -0.34
DDX41-215ENST00000512431 DNAJC28Q9NX36 388 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 RAB20Q9NX57 234 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 KIAA1257Q9ULG3 409 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 TRAF3IP3Q9Y228 551 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 ENTPD2Q9Y5L3 495 aa12.95□□□□□ -0.34
DDX41-215ENST00000512431 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 CDRT15L2A8MXV6 281 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 H3BM21 787 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 ALOX15BO15296 676 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 STX10O60499 249 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 TCEA3O75764 348 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 YEATS4O95619 227 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 MOCS2O96007 188 aaPredicted RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 LTFP02788 710 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 VDRP11473 427 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 VAV1P15498 845 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 PRLRP16471 622 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 HNRNPA2B1P22626 353 aaKnown RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 OXCT1P55809 520 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 YWHAEP62258 255 aaKnown RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 ZNF177Q13360 481 aaPredicted RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 CDKN3Q16667 212 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 C8orf34Q49A92 452 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 ZNF542PQ5EBM4 170 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 AGBL4Q5VU57 503 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 LGI2Q8N0V4 545 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 TMEM145Q8NBT3 493 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 OR13H1Q8NG92 308 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 KLK6Q92876 244 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 ERCC4Q92889 916 aaPredicted RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 ARRDC3Q96B67 414 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 MYEOVQ96EZ4 313 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 FCRL2Q96LA5 508 aaPredicted RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 STARD5Q9NSY2 213 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 SLC25A13Q9UJS0 675 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 SARDHQ9UL12 918 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 ATXN7L1Q9ULK2 861 aaPredicted RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 TLR6Q9Y2C9 796 aa12.94□□□□□ -0.34
DDX41-215ENST00000512431 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
DDX41-215ENST00000512431 SUV39H1O43463 412 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 KLRC4O43908 158 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 BNIP3LO60238 219 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 NEBLO76041 1014 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 APOEP02649 317 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 AFPP02771 609 aaKnown RBP12.93□□□□□ -0.34
DDX41-215ENST00000512431 ITGB2P05107 769 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 MXI1P50539 228 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 LINC00303Q3SY05 128 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 EFL1Q7Z2Z2 1120 aaKnown RBP12.93□□□□□ -0.34
DDX41-215ENST00000512431 CLEC14AQ86T13 490 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms