RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 LATO43561 262 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 CLDN11O75508 207 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 CD38P28907 300 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 DRD3P35462 400 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 CLCN1P35523 988 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 IL9RQ01113 521 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 ZNF177Q13360 481 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 OR8D1Q8WZ84 308 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 FAM131CQ96AQ9 280 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 ALG14Q96F25 216 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 FEM1AQ9BSK4 669 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 KDM4CQ9H3R0 1056 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 CCDC86Q9H6F5 360 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 ANKRD11Q6UB99 2663 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 LAMA5O15230 3695 aa15.13■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3DA0A087WVF3 549 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3IA0A087WXS9 549 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3EA0A087X179 549 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3KA0A087X1G2 549 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 A0A1W2PR77 199 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3FA6NER0 549 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 GOLGA8CPA6NN73 597 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3LB9A6J9 549 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 FOXN3O00409 490 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 ALOX15BO15296 676 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 YKT6O15498 198 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 ATP9BO43861 1147 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 PAGE1O75459 146 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 WNT1P04628 370 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3HP0C7X1 549 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 PNMA6AP0CW24 399 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 GGCXP38435 758 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 IRAK1P51617 712 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 BPIFB4P59827 614 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 C5orf22Q49AR2 442 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 ACCSLQ4AC99 568 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 SLC45A4Q5BKX6 768 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 BRMS1LQ5PSV4 323 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 FAM46CQ5VWP2 391 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3GQ6DHY5 549 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3CQ6IPX1 549 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 FAM71AQ8IYT1 594 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D3Q8IZP1 549 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 GALNT15Q8N3T1 639 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 OR52K2Q8NGK3 314 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 SERAC1Q96JX3 654 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 NDST4Q9H3R1 872 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 GDF3Q9NR23 364 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 FTSJ1Q9UET6 329 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 VPS28Q9UK41 221 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 STAP1Q9ULZ2 295 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 TBC1D30Q9Y2I9 924 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 OR51B4Q9Y5P0 310 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 COL5A1P20908 1838 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 ZFYVE26Q68DK2 2539 aa15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 DSPP15924 2871 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-229ENST00000512418 C1QTNF3-AMACRE9PGA6 284 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 WNT9AO14904 365 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PRKCSHP14314 528 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 ARRB1P49407 418 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 METAP1P53582 386 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 CDH4P55283 916 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PPP2CBP62714 309 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PPP2CAP67775 309 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 VWA3BQ502W6 1294 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 OTUD1Q5VV17 481 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 NAPEPLDQ6IQ20 393 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 C14orf80Q86SX3 495 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 SH2D3CQ8N5H7 860 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 TMEM35BQ8NCS4 154 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PGAP3Q96FM1 320 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 NPY6RQ99463 290 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 TUBGCP2Q9BSJ2 902 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 TKTL2Q9H0I9 626 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 MUC3BQ9H195 1237 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PDCL3Q9H2J4 239 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 WDCPQ9H6R7 721 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PLCB1Q9NQ66 1216 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PIGVQ9NUD9 493 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 TMEM51Q9NW97 253 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 ARHGEF38Q9NXL2 777 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PPM1HQ9ULR3 514 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 PAXBP1Q9Y5B6 917 aa15.11■□□□□ 0.01
CCHCR1-229ENST00000512418 MCF2LO15068 1137 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 PLRG1O43660 514 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 RTN2O75298 545 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 ITGAVP06756 1048 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 CDH5P33151 784 aaPredicted RBP15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 NUDT1P36639 197 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 SCNN1AP37088 669 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 CXCR3P49682 368 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 NXPH1P58417 271 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 KRT83P78385 493 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 RAPGEF1Q13905 1077 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 DLG2Q15700 870 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 SMAD1Q15797 465 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 DPCR1Q3MIW9 517 aa15.1■□□□□ 0.01
CCHCR1-229ENST00000512418 MIIPQ5JXC2 388 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms