RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ERVW-1Q9UQF0 538 aa9.45□□□□□ -0.9
NUP54-211ENST00000512151 OTOGQ6ZRI0 2925 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 ITIH6Q6UXX5 1313 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 PRAMEF33A0A0G2JMD5 474 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 EDDM13A0A1B0GTR0 161 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 TARSL2A2RTX5 802 aaKnown RBP9.44□□□□□ -0.9
NUP54-211ENST00000512151 AGRPO00253 132 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 NTN3O00634 580 aaPredicted RBP9.44□□□□□ -0.9
NUP54-211ENST00000512151 PRAMEF10O60809 474 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 TBL1XO60907 577 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 SEMA7AO75326 666 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 ADH1BP00325 375 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 IL1BP01584 269 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 ETV5P41161 510 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 PSEN1P49768 467 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 TAS2R38P59533 333 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 ST8SIA6P61647 398 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 CYP24A1Q07973 514 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 CNTN1Q12860 1018 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 TRPC3Q13507 836 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 PSMD6Q15008 389 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 DEFB133Q30KQ1 61 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 SETMARQ53H47 684 aaPredicted RBP9.44□□□□□ -0.9
NUP54-211ENST00000512151 AGBL4Q5VU57 503 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 BORAQ6PGQ7 559 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 GCNT7Q6ZNI0 430 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 DTX1Q86Y01 620 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 ZSCAN1Q8NBB4 408 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 TPCN2Q8NHX9 752 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 PLEKHO2Q8TD55 490 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 NDRG1Q92597 394 aaKnown RBP9.44□□□□□ -0.9
NUP54-211ENST00000512151 AK8Q96MA6 479 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 ZNF396Q96N95 335 aaPredicted RBP9.44□□□□□ -0.9
NUP54-211ENST00000512151 DUSP23Q9BVJ7 150 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 FOXP3Q9BZS1 431 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 DNAJC28Q9NX36 388 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 PISDQ9UG56 409 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 RCOR1Q9UKL0 485 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 PCDHB13Q9Y5F0 798 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 ZFHX3Q15911 3703 aa9.44□□□□□ -0.9
NUP54-211ENST00000512151 NEMP2A6NFY4 417 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 NVLO15381 856 aaKnown RBP9.43□□□□□ -0.9
NUP54-211ENST00000512151 VNN1O95497 513 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 KRT7P08729 469 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 GAP43P17677 238 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 ITIH1P19827 911 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 SLC6A4P31645 630 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 ATICP31939 592 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 NUDT1P36639 197 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 CASP4P49662 377 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 NUMBP49757 651 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 STK19P49842 368 aaPredicted RBP9.43□□□□□ -0.9
NUP54-211ENST00000512151 MLLT10P55197 1068 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 FZD2Q14332 565 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 SLC39A14Q15043 492 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 NR0B2Q15466 257 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 ZNF699Q32M78 642 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 FSCBQ5H9T9 825 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 TPRG1LQ5T0D9 272 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 ADGRF1Q5T601 910 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 PIK3R6Q5UE93 754 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 ARL6IP4Q66PJ3 421 aaKnown RBP9.43□□□□□ -0.9
NUP54-211ENST00000512151 OR6B2Q6IFH4 312 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 RSRC2Q7L4I2 434 aaKnown RBP9.43□□□□□ -0.9
NUP54-211ENST00000512151 BHLHA9Q7RTU4 235 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 SLC35F3Q8IY50 421 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 SSC4DQ8WTU2 575 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 JPH3Q8WXH2 748 aaPredicted RBP9.43□□□□□ -0.9
NUP54-211ENST00000512151 SYAP1Q96A49 352 aaPredicted RBP9.43□□□□□ -0.9
NUP54-211ENST00000512151 CDK5RAP1Q96SZ6 601 aaKnown RBP9.43□□□□□ -0.9
NUP54-211ENST00000512151 CCDC3Q9BQI4 270 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 SYNDIG1Q9H7V2 258 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 PREBQ9HCU5 417 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 PNPLA8Q9NP80 782 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 OLFML3Q9NRN5 406 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 EVA1BQ9NVM1 165 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 STIM2Q9P246 746 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 TUBD1Q9UJT1 453 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 FBXO2Q9UK22 296 aaPredicted RBP9.43□□□□□ -0.9
NUP54-211ENST00000512151 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
NUP54-211ENST00000512151 KIAA0391O15091 583 aaKnown RBP9.42□□□□□ -0.9
NUP54-211ENST00000512151 MSI1O43347 362 aaKnown RBP9.42□□□□□ -0.9
NUP54-211ENST00000512151 RNGTTO60942 597 aaKnown RBP9.42□□□□□ -0.9
NUP54-211ENST00000512151 YEATS4O95619 227 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 ASLP04424 464 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 GNLYP22749 145 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 GRNP28799 593 aaKnown RBP9.42□□□□□ -0.9
NUP54-211ENST00000512151 OXCT1P55809 520 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 KRT85P78386 507 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 SPIDRQ14159 915 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 STK38Q15208 465 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 SNRNP35Q16560 246 aaKnown RBP9.42□□□□□ -0.9
NUP54-211ENST00000512151 ZNF284Q2VY69 593 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 FAM133BQ5BKY9 247 aaKnown RBP9.42□□□□□ -0.9
NUP54-211ENST00000512151 ZNF667Q5HYK9 610 aa9.42□□□□□ -0.9
NUP54-211ENST00000512151 PITRM1Q5JRX3 1037 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms