RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 LINC00473A8K010 186 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 BTBD19C9JJ37 291 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 H7C1Q1 480 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 SYN3O14994 580 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 ESRRBO95718 433 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 ELFN1P0C7U0 828 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 MPLP40238 635 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 EFNB1P98172 346 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 EPS8Q12929 822 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 TUBA3CQ13748 450 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 MFSD13AQ14CX5 517 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 WTAPQ15007 396 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 SLC18A3Q16572 532 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 SLC9B1Q4ZJI4 515 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 UBAP2Q5T6F2 1119 aaKnown RBP5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 VWA5B1Q5TIE3 1220 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 TUBA3EQ6PEY2 450 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 NCEH1Q6PIU2 408 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 MDGA2Q7Z553 956 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 PLD5Q8N7P1 536 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 TERB1Q8NA31 727 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 SETD9Q8NE22 299 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 FAM120BQ96EK7 910 aaKnown RBP5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 PERPQ96FX8 193 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 PDLIM2Q96JY6 352 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 PLEKHG4BQ96PX9 1271 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 ASB2Q96Q27 587 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 CENPOQ9BU64 300 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 CIPCQ9C0C6 399 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 TMEM248Q9NWD8 314 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 HSPB7Q9UBY9 170 aa5.87□□□□□ -1.47
HMGB1P47-201ENST00000511281 LIPT2A6NK58 231 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 CLIC1O00299 241 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 AP3D1O14617 1153 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 LDLRAD4O15165 306 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 HBP1O60381 514 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 TSPAN9O75954 239 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 PGM3O95394 542 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 ENO1P06733 434 aaKnown RBP5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 EBLN1P0CF75 366 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 DRD4P21917 467 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 CPOXP36551 454 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 AVPR1BP47901 424 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 CCT8P50990 548 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 COPB1P53618 953 aaKnown RBP5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 IL13RA2Q14627 380 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 ZNF667Q5HYK9 610 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 PCID2Q5JVF3 399 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 MIIPQ5JXC2 388 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 LAIR1Q6GTX8 287 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 TMEM81Q6P7N7 255 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 ZNF474Q6S9Z5 364 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 RRM2BQ7LG56 351 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 RFX6Q8HWS3 928 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 C11orf65Q8NCR3 313 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 OR52N4Q8NGI2 321 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 SLC9A6Q92581 669 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 KLHL29Q96CT2 875 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 ZNF503Q96F45 646 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 MPHOSPH8Q99549 860 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 FOXJ2Q9P0K8 574 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 UPB1Q9UBR1 384 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 SLC25A13Q9UJS0 675 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 SNX8Q9Y5X2 465 aa5.86□□□□□ -1.47
HMGB1P47-201ENST00000511281 TMEM247A6NEH6 219 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 B4DLN1 442 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 KCNJ18B7U540 433 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 VILLO15195 856 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 PDE8BO95263 885 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 HLA-DQA2P01906 255 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 CSH1P0DML2 217 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 CSH2P0DML3 217 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 NR2F1P10589 423 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 AKR1B1P15121 316 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 ZNF20P17024 532 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 IL11P20809 199 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 RRM1P23921 792 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 GSTM2P28161 218 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 TYK2P29597 1187 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 ADRA1BP35368 520 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 BLKP51451 505 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 NLRP5P59047 1200 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 CYP4F2P78329 520 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 MRPS35P82673 323 aaKnown RBP5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 MC1RQ01726 317 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 ABHD18Q0P651 414 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 AIMP2Q13155 320 aaKnown RBP5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 KCNB1Q14721 858 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 RPE65Q16518 533 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 AP5B1Q2VPB7 878 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 RILPL1Q5EBL4 403 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 ERICH6BQ5W0A0 696 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 CDC73Q6P1J9 531 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 CYP20A1Q6UW02 462 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 VSTM1Q6UX27 236 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 Q6YL49 198 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 DCDC5Q6ZRR9 648 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 TTLL10Q6ZVT0 673 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 IKBIPQ70UQ0 350 aa5.85□□□□□ -1.47
HMGB1P47-201ENST00000511281 SZRD1Q7Z422 152 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms