RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SULT2A1Q06520 285 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 SCAPQ12770 1279 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 TSR1Q2NL82 804 aaKnown RBP14.34□□□□□ -0.11
DDX41-212ENST00000511040 HNRNPA1L2Q32P51 320 aaKnown RBP14.34□□□□□ -0.11
DDX41-212ENST00000511040 ACCSLQ4AC99 568 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 C6orf118Q5T5N4 469 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 C9orf64Q5T6V5 341 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 LPCAT2Q7L5N7 544 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 SETD3Q86TU7 594 aaPredicted RBP14.34□□□□□ -0.11
DDX41-212ENST00000511040 C11orf74Q86VG3 221 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 TBC1D31Q96DN5 1066 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 BTBD6Q96KE9 485 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 PEBP4Q96S96 227 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 PPP1R9BQ96SB3 815 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 CHP1Q99653 195 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 DEF6Q9H4E7 631 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 MRPL47Q9HD33 250 aaKnown RBP14.34□□□□□ -0.11
DDX41-212ENST00000511040 ABHD10Q9NUJ1 306 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 DNAI1Q9UI46 699 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 VPS51Q9UID3 782 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 SLC25A13Q9UJS0 675 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 NENFQ9UMX5 172 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 NEU3Q9UQ49 428 aa14.34□□□□□ -0.11
DDX41-212ENST00000511040 FRYLO94915 3013 aa14.33□□□□□ -0.11
DDX41-212ENST00000511040 DOCK4Q8N1I0 1966 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 K7ERQ8 282 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 MT-CO1P00395 513 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 ACADMP11310 421 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 RHOQP17081 205 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 MIPP30301 263 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 ACVRL1P37023 503 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 NNMTP40261 264 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 PTGER3P43115 390 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 TPMTP51580 245 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 GALCP54803 685 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 TBX2Q13207 712 aaPredicted RBP14.33□□□□□ -0.12
DDX41-212ENST00000511040 CA9Q16790 459 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 STK40Q8N2I9 435 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 TOE1Q96GM8 510 aaKnown RBP14.33□□□□□ -0.12
DDX41-212ENST00000511040 LOXL4Q96JB6 756 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 NUP85Q9BW27 656 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 PACSIN1Q9BY11 444 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 ITM2CQ9NQX7 267 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 NDFIP2Q9NV92 336 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 USP36Q9P275 1121 aaKnown RBP14.33□□□□□ -0.12
DDX41-212ENST00000511040 PLXND1Q9Y4D7 1925 aa14.33□□□□□ -0.12
DDX41-212ENST00000511040 RALGAPA1Q6GYQ0 2036 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 EDDM13A0A1B0GTR0 161 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 ILVBLA1L0T0 632 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 AKR1B15C9JRZ8 316 aaPredicted RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 CBX4O00257 560 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 AKR1B10O60218 316 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 BNIP3LO60238 219 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 NDUFS2O75306 463 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 RNF8O76064 485 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 CYP1A2P05177 515 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 EPHB2P29323 1055 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 CD6P30203 668 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 L1CAMP32004 1257 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 MPLP40238 635 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 ZNF75DP51815 510 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 KRT83P78385 493 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 GNA12Q03113 381 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 ARID5BQ14865 1188 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 SF3A2Q15428 464 aaKnown RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 ZNF776Q68DI1 518 aaPredicted RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 SLC36A4Q6YBV0 504 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 CYP2U1Q7Z449 544 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 NLRP14Q86W24 1093 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 MMAAQ8IVH4 418 aaKnown RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 KDM1BQ8NB78 822 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 GANCQ8TET4 914 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 FNIP1Q8TF40 1166 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 FRS2Q8WU20 508 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 PIGKQ92643 395 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 PTPRN2Q92932 1015 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 SNRNP25Q9BV90 132 aaKnown RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 C2orf49Q9BVC5 232 aaPredicted RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 GPR174Q9BXC1 333 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 RSPH9Q9H1X1 276 aaPredicted RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 DHX35Q9H5Z1 703 aaKnown RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 ATP13A1Q9HD20 1204 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 SEMA4GQ9NTN9 838 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 SPTLC3Q9NUV7 552 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 ANAPC7Q9UJX3 599 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 AP4E1Q9UPM8 1137 aa14.32□□□□□ -0.12
DDX41-212ENST00000511040 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 ATXN2Q99700 1313 aaKnown RBP14.32□□□□□ -0.12
DDX41-212ENST00000511040 BCLAF3A2AJT9 711 aaKnown RBP14.31□□□□□ -0.12
DDX41-212ENST00000511040 TARSL2A2RTX5 802 aaKnown RBP14.31□□□□□ -0.12
DDX41-212ENST00000511040 PRPSAP2O60256 369 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 LRCH4O75427 683 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 TCF4P15884 667 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 PSMD8P48556 350 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
DDX41-212ENST00000511040 DLG2Q15700 870 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 SLC18A3Q16572 532 aa14.31□□□□□ -0.12
DDX41-212ENST00000511040 ASTE1Q2TB18 679 aaPredicted RBP14.31□□□□□ -0.12
DDX41-212ENST00000511040 IL31Q6EBC2 164 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms