RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 PPP1R2P41236 205 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 GPD2P43304 727 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 RPL34P49207 117 aaKnown RBP10.73□□□□□ -0.69
DDX41-211ENST00000510171 NUMBP49757 651 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 PLK1P53350 603 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 TLE3Q04726 772 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 CCDC173Q0VFZ6 552 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 STIM1Q13586 685 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 PROX2Q3B8N5 592 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 TBC1D25Q3MII6 688 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 HS1BP3Q53T59 392 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 RRAGAQ7L523 313 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 TRIM69Q86WT6 500 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 ELOA2Q8IYF1 753 aaPredicted RBP10.73□□□□□ -0.69
DDX41-211ENST00000510171 CCAR2Q8N163 923 aaKnown RBP10.73□□□□□ -0.69
DDX41-211ENST00000510171 ATP6V0D2Q8N8Y2 350 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 KAT5Q92993 513 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 FAM131CQ96AQ9 280 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 MED15Q96RN5 788 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.73□□□□□ -0.69
DDX41-211ENST00000510171 PTPRBP23467 1997 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 NUMA1Q14980 2115 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 KNL1Q8NG31 2342 aa10.73□□□□□ -0.69
DDX41-211ENST00000510171 MYH10P35580 1976 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 CABIN1Q9Y6J0 2220 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 KCNU1A8MYU2 1149 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 C1QTNF3-AMACRE9PGA6 284 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 PSMA7O14818 248 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 RNGTTO60942 597 aaKnown RBP10.72□□□□□ -0.69
DDX41-211ENST00000510171 TRUB2O95900 331 aaKnown RBP10.72□□□□□ -0.69
DDX41-211ENST00000510171 SLC2A3P11169 496 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 PLA2G2AP14555 144 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 ZNF18P17022 549 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 VASPP50552 380 aaPredicted RBP10.72□□□□□ -0.69
DDX41-211ENST00000510171 METAP1P53582 386 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 YWHAZP63104 245 aaKnown RBP10.72□□□□□ -0.69
DDX41-211ENST00000510171 CXADRP78310 365 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 DAB2P98082 770 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 SETMARQ53H47 684 aaPredicted RBP10.72□□□□□ -0.69
DDX41-211ENST00000510171 RABGAP1LQ5R372 815 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 TTC39BQ5VTQ0 682 aaPredicted RBP10.72□□□□□ -0.69
DDX41-211ENST00000510171 KDM7AQ6ZMT4 941 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 ERICH1Q86X53 443 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 SPACA3Q8IXA5 215 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 SLC25A45Q8N413 288 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 ZNF843Q8N446 348 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 STK32AQ8WU08 396 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 ERCC4Q92889 916 aaPredicted RBP10.72□□□□□ -0.69
DDX41-211ENST00000510171 RNF34Q969K3 372 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 COL26A1Q96A83 441 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 SLC4A5Q9BY07 1137 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 THAP9Q9H5L6 903 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 POPDC2Q9HBU9 364 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 PREBQ9HCU5 417 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 KLHL11Q9NVR0 708 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 SARDHQ9UL12 918 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 PPM1HQ9ULR3 514 aa10.72□□□□□ -0.69
DDX41-211ENST00000510171 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.71□□□□□ -0.69
DDX41-211ENST00000510171 A0A1B0GVM2 712 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 TRIM49BA6NDI0 452 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 TCAF2A6NFQ2 919 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 CAPN8A6NHC0 703 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 LOC400499M0QZD8 3231 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 MCF2LO15068 1137 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 P4HA2O15460 535 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 MED7O43513 233 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 ATP9BO43861 1147 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 IGLV3-25P01717 112 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 KRT5P13647 590 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 DGKAP23743 735 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 CDK17Q00537 523 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 GCNT1Q02742 428 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 CFHR1Q03591 330 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 CCDC15Q0P6D6 951 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 KCNMA1Q12791 1236 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 KCNH2Q12809 1159 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 CNTN1Q12860 1018 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 ZNF177Q13360 481 aaPredicted RBP10.71□□□□□ -0.69
DDX41-211ENST00000510171 GOLGA4Q13439 2230 aaKnown RBP10.71□□□□□ -0.69
DDX41-211ENST00000510171 DLG2Q15700 870 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 POM121L1PQ3SYA9 428 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 CCDC40Q4G0X9 1142 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 AGBL4Q5VU57 503 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 BROXQ5VW32 411 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 CXorf57Q6NSI4 855 aaKnown RBP10.71□□□□□ -0.69
DDX41-211ENST00000510171 DENND1BQ6P3S1 775 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 IGSF10Q6WRI0 2623 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 TMEM110Q86TL2 294 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 CIR1Q86X95 450 aaPredicted RBP10.71□□□□□ -0.69
DDX41-211ENST00000510171 ARHGEF19Q8IW93 802 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 LSMEM2Q8N112 164 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 EHBP1Q8NDI1 1231 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 ZNF248Q8NDW4 579 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 OR4C6Q8NH72 309 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 LMO3Q8TAP4 145 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 ALG14Q96F25 216 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 DHTKD1Q96HY7 919 aaPredicted RBP10.71□□□□□ -0.69
DDX41-211ENST00000510171 CEP63Q96MT8 703 aa10.71□□□□□ -0.69
DDX41-211ENST00000510171 ZNF578Q96N58 590 aaPredicted RBP10.71□□□□□ -0.69
DDX41-211ENST00000510171 LGMNQ99538 433 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms