RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, human

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-210	ENST00000509576	STX17	P56962	302 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	PDCL	Q13371	301 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	ELAVL3	Q14576	367 aa	Known RBP	13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	STIL	Q15468	1287 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	PROX2	Q3B8N5	592 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	CCDC40	Q4G0X9	1142 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	NAPEPLD	Q6IQ20	393 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576		Q6ZVU0	165 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	ZNF683	Q8IZ20	524 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	NELFB	Q8WX92	580 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	BTN2A3P	Q96KV6	586 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	SLC2A13	Q96QE2	648 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	GDF3	Q9NR23	364 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	UCKL1	Q9NWZ5	548 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	PPM1H	Q9ULR3	514 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	CTNND2	Q9UQB3	1225 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	SNX10	Q9Y5X0	201 aa		13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	ASH1L	Q9NR48	2969 aa	Known RBP	13.78	□□□□□ -0.2
DDX41-210	ENST00000509576	TBC1D3D	A0A087WVF3	549 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3I	A0A087WXS9	549 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3E	A0A087X179	549 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3K	A0A087X1G2	549 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	LY6G6E	A0A0G2JKS1	128 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3L	B9A6J9	549 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576		K7ERQ8	282 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	P4HA2	O15460	535 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	ATP9B	O43861	1147 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	DFNA5	O60443	496 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	GRAP2	O75791	330 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	CNTN5	O94779	1100 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	ADH1B	P00325	375 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3H	P0C7X1	549 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	MYF5	P13349	255 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	MARS	P56192	900 aa	Known RBP	13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	YWHAZ	P63104	245 aa	Known RBP	13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	INSM1	Q01101	510 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	SEMG2	Q02383	582 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	MORC3	Q14149	939 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	RTP5	Q14D33	572 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	PIP5KL1	Q5T9C9	394 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3G	Q6DHY5	549 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3C	Q6IPX1	549 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	DEFB106A	Q8N104	65 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TMEM145	Q8NBT3	493 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	STK32A	Q8WU08	396 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	KLK6	Q92876	244 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	VOPP1	Q96AW1	172 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	ARRDC3	Q96B67	414 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	NOX5	Q96PH1	765 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	FEM1A	Q9BSK4	669 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	ERVMER34-1	Q9H9K5	563 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	POPDC2	Q9HBU9	364 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	TMPRSS4	Q9NRS4	437 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576		U3KQA8	63 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	ZNF462	Q96JM2	2506 aa		13.77	□□□□□ -0.21
DDX41-210	ENST00000509576	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576		A0A1B0GVM2	712 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	TCAF2	A6NFQ2	919 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	BIN1	O00499	593 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	PSMA7	O14818	248 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	CASC3	O15234	703 aa	Known RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	SNAP91	O60641	907 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	RNASEH1	O60930	286 aa	Known RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	ERBB2	P04626	1255 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	PNMA6A	P0CW24	399 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	SRC	P12931	536 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	KRT5	P13647	590 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	JUP	P14923	745 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	SLC9A1	P19634	815 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	ABCB4	P21439	1286 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	VASP	P50552	380 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	C1QBP	Q07021	282 aa	Known RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	AUH	Q13825	339 aa	Known RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	ALF	Q53S48	1182 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	DPY19L2P1	Q6NXN4	242 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	OLFML1	Q6UWY5	402 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	KDM7A	Q6ZMT4	941 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	FAM183BP	Q6ZVS7	135 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	PASD1	Q8IV76	773 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	SLC22A18AS	Q8N1D0	253 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	ZNF557	Q8N988	423 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	MFSD2A	Q8NA29	543 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	TIGD1	Q96MW7	591 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	SPAG5	Q96R06	1193 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	MYOC	Q99972	504 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	DDX50	Q9BQ39	737 aa	Known RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	CRACR2A	Q9BSW2	395 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	THAP9	Q9H5L6	903 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	FZD3	Q9NPG1	666 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	COX16	Q9P0S2	106 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	VANGL2	Q9ULK5	521 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	ZFR2	Q9UPR6	939 aa	Known RBP	13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	PCDHB1	Q9Y5F3	818 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	HS3ST4	Q9Y661	456 aa		13.76	□□□□□ -0.21
DDX41-210	ENST00000509576	FLNB	O75369	2602 aa	Known RBP	13.75	□□□□□ -0.21
DDX41-210	ENST00000509576	LRP4	O75096	1905 aa		13.75	□□□□□ -0.21

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