RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 BRCC3P46736 316 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 RAP1GDS1P52306 607 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 NAB1Q13506 487 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 CCDC6Q16204 474 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 MUM1Q2TAK8 710 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 RNF220Q5VTB9 566 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.21□□□□□ -0.62
SEC31A-228ENST00000509142 C3orf58Q8NDZ4 430 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 HBS1LQ9Y450 684 aaKnown RBP11.21□□□□□ -0.62
SEC31A-228ENST00000509142 SCN4AP35499 1836 aa11.21□□□□□ -0.62
SEC31A-228ENST00000509142 MEI4A8MW99 385 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 ALDOAP04075 364 aaKnown RBP11.2□□□□□ -0.62
SEC31A-228ENST00000509142 SP100P23497 879 aaPredicted RBP11.2□□□□□ -0.62
SEC31A-228ENST00000509142 SPRP35270 261 aaPredicted RBP11.2□□□□□ -0.62
SEC31A-228ENST00000509142 ALDH18A1P54886 795 aaKnown RBP11.2□□□□□ -0.62
SEC31A-228ENST00000509142 MFSD14CQ5VZR4 134 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 TMEM154Q6P9G4 183 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 SLC25A41Q8N5S1 370 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 STOML1Q9UBI4 398 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 NUP205Q92621 2012 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 DFFAO00273 331 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 USP1O94782 785 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 AP2A1O95782 977 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 TPH1P17752 444 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 CD52P31358 61 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 PDE1CQ14123 709 aaPredicted RBP11.2□□□□□ -0.62
SEC31A-228ENST00000509142 AGMOQ6ZNB7 445 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 STRA8Q7Z7C7 330 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 THEM5Q8N1Q8 247 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 ARHGAP24Q8N264 748 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 FAM161BQ96MY7 647 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 BRD8Q9H0E9 1235 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 MMADHCQ9H3L0 296 aaPredicted RBP11.2□□□□□ -0.62
SEC31A-228ENST00000509142 RAD54BQ9Y620 910 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 CCDC78A2IDD5 438 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 LRIG2O94898 1065 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 CHRNA1P02708 482 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
SEC31A-228ENST00000509142 NFKB1P19838 968 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 NIPAL4Q0D2K0 466 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 PPM1JQ5JR12 505 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 GRTP1Q5TC63 336 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 THEMIS2Q5TEJ8 643 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 CST9Q5W186 159 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 C17orf99Q6UX52 265 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 RIPOR1Q6ZS17 1223 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 RAB3IL1Q8TBN0 382 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 CPNE1Q99829 537 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 DMAP1Q9NPF5 467 aaPredicted RBP11.2□□□□□ -0.62
SEC31A-228ENST00000509142 ANLNQ9NQW6 1124 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 TMEM30AQ9NV96 361 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 TRHDEQ9UKU6 1024 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 ASB3Q9Y575 518 aa11.2□□□□□ -0.62
SEC31A-228ENST00000509142 SAT1P21673 171 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 COG7P83436 770 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 TSPY1Q01534 308 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 PPIDQ08752 370 aaKnown RBP11.19□□□□□ -0.62
SEC31A-228ENST00000509142 HSP90AA5PQ58FG0 334 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 NPWQ8N729 165 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 AGO3Q9H9G7 860 aaKnown RBP11.19□□□□□ -0.62
SEC31A-228ENST00000509142 C20orf96Q9NUD7 363 aaPredicted RBP11.19□□□□□ -0.62
SEC31A-228ENST00000509142 DLGAP2Q9P1A6 1054 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 PPM1HQ9ULR3 514 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 PADI3Q9ULW8 664 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 DNAJC16Q9Y2G8 782 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 C9IYK1 514 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 LMNAP02545 664 aaKnown RBP11.19□□□□□ -0.62
SEC31A-228ENST00000509142 HCAR3P49019 387 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 GJA9P57773 515 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 KLC1Q07866 573 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 SCAPQ12770 1279 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 CERCAMQ5T4B2 595 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 BTBD8Q5XKL5 378 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 MBLAC2Q68D91 279 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 ULK2Q8IYT8 1036 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 SREK1Q8WXA9 508 aaKnown RBP11.19□□□□□ -0.62
SEC31A-228ENST00000509142 GATA6Q92908 595 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 A0A088AWK7 358 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 ERI2A8K979 691 aaKnown RBP11.19□□□□□ -0.62
SEC31A-228ENST00000509142 PLIN3O60664 434 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 MAGEC1O60732 1142 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 FGF3P11487 239 aaPredicted RBP11.19□□□□□ -0.62
SEC31A-228ENST00000509142 ABCG1P45844 678 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 SLC1A6P48664 564 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 RABGAP1LQ5R372 815 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 TEDDM1Q5T9Z0 273 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 BNIPLQ7Z465 357 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 CMC1Q7Z7K0 106 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 TAC4Q86UU9 113 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 STMN2Q93045 179 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 TSNARE1Q96NA8 513 aa11.19□□□□□ -0.62
SEC31A-228ENST00000509142 DDX50Q9BQ39 737 aaKnown RBP11.19□□□□□ -0.62
SEC31A-228ENST00000509142 SPECC1L-ADORA2AF8WAN1 911 aa11.18□□□□□ -0.62
SEC31A-228ENST00000509142 GRIK1P39086 918 aa11.18□□□□□ -0.62
SEC31A-228ENST00000509142 UPP1Q16831 310 aa11.18□□□□□ -0.62
SEC31A-228ENST00000509142 OVOS1Q6IE37 1185 aa11.18□□□□□ -0.62
SEC31A-228ENST00000509142 RAPH1Q70E73 1250 aa11.18□□□□□ -0.62
SEC31A-228ENST00000509142 RASAL3Q86YV0 1011 aa11.18□□□□□ -0.62
SEC31A-228ENST00000509142 TMPRSS6Q8IU80 811 aa11.18□□□□□ -0.62
SEC31A-228ENST00000509142 DCLK2Q8N568 766 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms