RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CARNMT1Q8N4J0 409 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 ALLCQ8N6M5 410 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 NOA1Q8NC60 698 aaKnown RBP10.64□□□□□ -0.71
RFC1-211ENST00000509084 CCNYQ8ND76 341 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 RIN3Q8TB24 985 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 NSMCE1Q8WV22 266 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 IRF7Q92985 503 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 NXPE3Q969Y0 559 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 RTP4Q96DX8 246 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 TSGA13Q96PP4 275 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 HS3ST6Q96QI5 342 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 VAT1Q99536 393 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 BBS2Q9BXC9 721 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 KLC2Q9H0B6 622 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 SP110Q9HB58 689 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 PCDH9Q9HC56 1237 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 KIAA1522Q9P206 1035 aaPredicted RBP10.64□□□□□ -0.71
RFC1-211ENST00000509084 SAE1Q9UBE0 346 aaPredicted RBP10.64□□□□□ -0.71
RFC1-211ENST00000509084 HPCAL4Q9UM19 191 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 UTP11Q9Y3A2 253 aaKnown RBP10.64□□□□□ -0.71
RFC1-211ENST00000509084 MFHAS1Q9Y4C4 1052 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 WNT6Q9Y6F9 365 aa10.64□□□□□ -0.71
RFC1-211ENST00000509084 CXorf51AA0A1B0GTR3 108 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 TARSL2A2RTX5 802 aaKnown RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 ZSCAN5CA6NGD5 496 aaPredicted RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 RASA4BC9J798 803 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 DFFAO00273 331 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 TRDMT1O14717 391 aaKnown RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 SCAMP3O14828 347 aaKnown RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 HOXC11O43248 304 aaPredicted RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 RASA4O43374 803 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 RAD51CO43502 376 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 PSMC3P17980 439 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 HOXD9P28356 352 aaPredicted RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 VIPR2P41587 438 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 KCNJ1P48048 391 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 SGSHP51688 502 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 TERF1P54274 439 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 GNA12Q03113 381 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 AP1B1Q10567 949 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 NR1H3Q13133 447 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 PTK6Q13882 451 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 DSG2Q14126 1118 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 CCDC85BQ15834 202 aaPredicted RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 P3H1Q32P28 736 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 EML3Q32P44 896 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 LEXMQ3ZCV2 418 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 TMCO4Q5TGY1 634 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 FYB2Q5VWT5 728 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 TANGO2Q6ICL3 276 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 VITQ6UXI7 678 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 TPGS1Q6ZTW0 290 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 ZNF354CQ86Y25 554 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 CCDC13Q8IYE1 715 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 CPA6Q8N4T0 437 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 LRRN4CLQ8ND94 238 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 HTR3CQ8WXA8 447 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 MYEOVQ96EZ4 313 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 CELF6Q96J87 481 aaKnown RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 XPO6Q96QU8 1125 aaKnown RBP10.63□□□□□ -0.71
RFC1-211ENST00000509084 FAM118BQ9BPY3 351 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 TMEM121Q9BTD3 319 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 LRRC1Q9BTT6 524 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 SLC2A11Q9BYW1 496 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 SLC39A8Q9C0K1 460 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 PAK5Q9P286 719 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
RFC1-211ENST00000509084 GRXCR2A6NFK2 248 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 NEDD8-MDP1E9PL57 170 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 CHADO15335 359 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 KCNN4O15554 427 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 TTI1O43156 1089 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 CTIFO43310 598 aaKnown RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 HEXIM1O94992 359 aaKnown RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 MAP3K6O95382 1288 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 CYP17A1P05093 508 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 ADH5P11766 374 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 TYRP14679 529 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 RBL1P28749 1068 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 PTGIRP43119 386 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 PAPOLAP51003 745 aaKnown RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 GEMIN4P57678 1058 aaKnown RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 IL10RBQ08334 325 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 SERINC3Q13530 473 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 DMC1Q14565 340 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 DHCR24Q15392 516 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 PREPLQ4J6C6 727 aaPredicted RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 LY6G5CQ5SRR4 150 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 CXorf57Q6NSI4 855 aaKnown RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 METTL3Q86U44 580 aaKnown RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 TMEM25Q86YD3 366 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 ADGRG2Q8IZP9 1017 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 BBS5Q8N3I7 341 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 GPR161Q8N6U8 529 aaKnown RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 DCAF4L2Q8NA75 395 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 BBOF1Q8ND07 529 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 FIBINQ8TAL6 211 aa10.62□□□□□ -0.71
RFC1-211ENST00000509084 ARHGEF2Q92974 986 aaKnown RBP10.62□□□□□ -0.71
RFC1-211ENST00000509084 RSPRY1Q96DX4 576 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms