RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PLCB4Q15147 1175 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 MPEG1Q2M385 716 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 TTC31Q49AM3 519 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 CCDC30Q5VVM6 783 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 PLAG1Q6DJT9 500 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 GGT6Q6P531 493 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 USP17L6PQ6QN14 398 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 CCDC129Q6ZRS4 1044 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 KRT74Q7RTS7 529 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 CUZD1Q86UP6 607 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 LRRTM4Q86VH4 590 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 GATAD2AQ86YP4 633 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 C2CD5Q86YS7 1000 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 TCP11L2Q8N4U5 519 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 LSMEM1Q8N8F7 131 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 SLC44A5Q8NCS7 719 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 SPPL3Q8TCT6 385 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 WFIKKN2Q8TEU8 576 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 UCMAQ8WVF2 138 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 VMP1Q96GC9 406 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 C7orf26Q96N11 449 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 BAG1Q99933 345 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 TMEM204Q9BSN7 226 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 TUBB6Q9BUF5 446 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 CINPQ9BW66 212 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 RETREG1Q9H6L5 497 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 PRKRIP1Q9H875 184 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZWILCHQ9H900 591 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 MOV10Q9HCE1 1003 aaKnown RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 NECTIN3Q9NQS3 549 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 ITM2CQ9NQX7 267 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 DECR2Q9NUI1 292 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 ARL8BQ9NVJ2 186 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 CWC25Q9NXE8 425 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 SELENONQ9NZV5 590 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 MYO1AQ9UBC5 1043 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 DNAJB11Q9UBS4 358 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 ERRFI1Q9UJM3 462 aaPredicted RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 AGO2Q9UKV8 859 aaKnown RBP2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
DEPDC1B-204ENST00000509006 EYA2O00167 538 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ACKR2O00590 384 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 PRYO14603 147 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 CLGNO14967 610 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 DKC1O60832 514 aaKnown RBP eCLIP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 CBFA2T3O75081 653 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 TSPAN9O75954 239 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 GFPT2O94808 682 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ANXA2P07355 339 aaKnown RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ITGA2BP08514 1039 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 TMEM225BP0DP42 221 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ST6GAL1P15907 406 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 TPH1P17752 444 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 TBXAS1P24557 533 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 PDIA3P30101 505 aaKnown RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ADD2P35612 726 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SERPINF1P36955 418 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 STAT1P42224 750 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SOX2P48431 317 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 P2RX3P56373 397 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 FMO1Q01740 532 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 PTK2BQ14289 1009 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ACOX1Q15067 660 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SLC35G1Q2M3R5 365 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 AASDHQ4L235 1098 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ODF2Q5BJF6 829 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ASPHD1Q5U4P2 390 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 CAPRIN2Q6IMN6 1127 aaKnown RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 KLHL17Q6TDP4 642 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 C16orf54Q6UWD8 224 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 FAM43BQ6ZT52 329 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 RNF44Q7L0R7 432 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 GET4Q7L5D6 327 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 GALNT5Q7Z7M9 940 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 CCDC117Q8IWD4 279 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 TTC30BQ8N4P2 665 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ZMIZ2Q8NF64 920 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 MBD3L2Q8NHZ7 208 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SUN3Q8TAQ9 357 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SMCR8Q8TEV9 937 aaPredicted RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 NOC3LQ8WTT2 800 aaKnown RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 TBC1D22AQ8WUA7 517 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 RFFLQ8WZ73 363 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 GOLGA1Q92805 767 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 MIB2Q96AX9 1013 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SDCCAG3Q96C92 435 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 RSRC1Q96IZ7 334 aaKnown RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 MAELQ96JY0 434 aaKnown RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 FAM227BQ96M60 508 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SLITRK1Q96PX8 696 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 MEIS3Q99687 375 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 MAGEB5Q9BZ81 275 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 ARHGAP39Q9C0H5 1083 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SYNCQ9H7C4 482 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 PREBQ9HCU5 417 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 OBP2BQ9NPH6 170 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 SMYD2Q9NRG4 433 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 PAPOLBQ9NRJ5 636 aaKnown RBP2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 KRT84Q9NSB2 600 aa2.62□□□□□ -1.99
DEPDC1B-204ENST00000509006 GJB4Q9NTQ9 266 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms