RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 FAM71BQ8TC56 605 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 CASKIN2Q8WXE0 1202 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 ISG20Q96AZ6 181 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 TBC1D31Q96DN5 1066 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 MRGPRX1Q96LB2 322 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 CFAP54Q96N23 3096 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 EPAS1Q99814 870 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 ACE2Q9BYF1 805 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 CATSPERBQ9H7T0 1116 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 PRDM16Q9HAZ2 1276 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 LUC7LQ9NQ29 371 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 CACNA2D2Q9NY47 1150 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 USP36Q9P275 1121 aaKnown RBP10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 RCOR3Q9P2K3 495 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 USP18Q9UMW8 372 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 NEU3Q9UQ49 428 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 PCDHGA5Q9Y5G8 931 aa10.88□□□□□ -0.67
POLR2J3-213ENST00000508848 EDDM13A0A1B0GTR0 161 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 ANTXRLA6NF34 631 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 ZNF487B1APH4 448 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 WASH3PC4AMC7 463 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 FAM72CH0Y354 149 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 PRPSAP2O60256 369 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 SRGAP2O75044 1071 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 ZMPSTE24O75844 475 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RHOBTB1O94844 696 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RETP07949 1114 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RHOCP08134 193 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 MZF1P28698 734 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 HOXD12P35452 270 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 NDST2P52849 883 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 GFPT1Q06210 699 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 DMWDQ09019 674 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 DPYSL2Q16555 572 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 MAP7D1Q3KQU3 841 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RAB6CQ53S08 254 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 INO80DQ53TQ3 878 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 FAM72AQ5TYM5 149 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 ANO7Q6IWH7 933 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 FAM72DQ6L9T8 149 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RETSATQ6NUM9 610 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 SCYL2Q6P3W7 929 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 FAM72BQ86X60 149 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 APCDD1Q8J025 514 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 LZTR1Q8N653 840 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 FRS2Q8WU20 508 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RUBCNQ92622 972 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 HHIPQ96QV1 700 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 NUP85Q9BW27 656 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 CEP44Q9C0F1 390 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RAB6CQ9H0N0 254 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 DUSP15Q9H1R2 295 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RSPH9Q9H1X1 276 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 PRSS16Q9NQE7 514 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 RAB23Q9ULC3 237 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 TPX2Q9ULW0 747 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 R4GN57 208 aa10.87□□□□□ -0.67
POLR2J3-213ENST00000508848 A0A0A6YYK5 440 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 TCRBV21S2A2A0A5A6 115 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 BTNL10A8MVZ5 291 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 RNASEH1O60930 286 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 PROSCO94903 275 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 EPHX1P07099 455 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 NDUFV2P19404 249 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 PRKCHP24723 683 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 EPHB2P29323 1055 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 CYLC1P35663 651 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 IRAK1P51617 712 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 COPAP53621 1224 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 GNA12Q03113 381 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 SIM2Q14190 667 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 ELAVL3Q14576 367 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 HADHQ16836 314 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 PARP15Q460N3 678 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 FNDC3BQ53EP0 1204 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 C9orf64Q5T6V5 341 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 TMCO4Q5TGY1 634 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 LRRC38Q5VT99 294 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 RNF219Q5W0B1 726 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 USP30Q70CQ3 517 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 POLNQ7Z5Q5 900 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 TMPRSS6Q8IU80 811 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 LRRC49Q8IUZ0 686 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 SH2D3CQ8N5H7 860 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 CADM4Q8NFZ8 388 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 OR52K2Q8NGK3 314 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 ZNF564Q8TBZ8 553 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 SORCS1Q8WY21 1168 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 PRCCQ92733 491 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 PTPRN2Q92932 1015 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 ARHGEF2Q92974 986 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 FAM131CQ96AQ9 280 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 SIPA1Q96FS4 1042 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 SPACA7Q96KW9 195 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 PSMB7Q99436 277 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 MKRN2Q9H000 416 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 TMPRSS4Q9NRS4 437 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 MPP6Q9NZW5 540 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 MYO1AQ9UBC5 1043 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms