RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 NDST2P52849 883 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 MESP2Q0VG99 397 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 ENPP2Q13822 863 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 GSE1Q14687 1217 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 POLD3Q15054 466 aaPredicted RBP9.37□□□□□ -0.91
NUP54-207ENST00000508583 SMTNL2Q2TAL5 461 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 RAB6CQ53S08 254 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 EMC10Q5UCC4 262 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 IL31Q6EBC2 164 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 RAD9BQ6WBX8 426 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 DSG4Q86SJ6 1040 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 NLRP14Q86W24 1093 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 LONP2Q86WA8 852 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 ZNF354CQ86Y25 554 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 TMEM139Q8IV31 216 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 LRRC8AQ8IWT6 810 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 RHOT1Q8IXI2 618 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 SYCE1Q8N0S2 351 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 ARFGAP1Q8N6T3 406 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 KCTD6Q8NC69 237 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 ATOH1Q92858 354 aaPredicted RBP9.37□□□□□ -0.91
NUP54-207ENST00000508583 P2RY11Q96G91 374 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 BTBD6Q96KE9 485 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 LMLNQ96KR4 655 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 SPACA7Q96KW9 195 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 PEBP4Q96S96 227 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 ZNF670Q9BS34 389 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 RAB6CQ9H0N0 254 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 ATP13A1Q9HD20 1204 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 TMPRSS4Q9NRS4 437 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 HAUS2Q9NVX0 235 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 CACNA2D2Q9NY47 1150 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 DDX56Q9NY93 547 aaKnown RBP9.37□□□□□ -0.91
NUP54-207ENST00000508583 ERVW-1Q9UQF0 538 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 SNX10Q9Y5X0 201 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 CACNA1HO95180 2353 aa9.37□□□□□ -0.91
NUP54-207ENST00000508583 EDDM13A0A1B0GTR0 161 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 TCRBV21S2A2A0A5A6 115 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 TARSL2A2RTX5 802 aaKnown RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 ARHGAP42A6NI28 874 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 ZNF487B1APH4 448 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 FAM72CH0Y354 149 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 K7ESF4 209 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 CBX4O00257 560 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 AXIN1O15169 862 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 PJA2O43164 708 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 PSTPIP1O43586 416 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 ADAM23O75077 832 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 ZNF217O75362 1048 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 CCDC175P0C221 793 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 MZF1P28698 734 aaPredicted RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 IL12RB1P42701 662 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 RECQLP46063 649 aaPredicted RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 CDH6P55285 790 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 ZBTB16Q05516 673 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 HNRNPA1L2Q32P51 320 aaKnown RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 TTC31Q49AM3 519 aaPredicted RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 USP39Q53GS9 565 aaKnown RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 KCNT1Q5JUK3 1230 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 FAM72AQ5TYM5 149 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 TMEM215Q68D42 235 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 FAM72DQ6L9T8 149 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 TMCO3Q6UWJ1 677 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 CYP4V2Q6ZWL3 525 aaPredicted RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 DAAM2Q86T65 1068 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 WDR5BQ86VZ2 330 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 FAM72BQ86X60 149 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 LRRC49Q8IUZ0 686 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 SFTPA1Q8IWL2 248 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 APCDD1Q8J025 514 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 UMODL1-AS1Q8N2C9 162 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 PYROXD2Q8N2H3 581 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 PGBD3Q8N328 593 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 RNF10Q8N5U6 811 aaKnown RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 PRSS33Q8NF86 280 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 CYB5D2Q8WUJ1 264 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 CASKIN2Q8WXE0 1202 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 HHIPQ96QV1 700 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 KCTD15Q96SI1 283 aaPredicted RBP9.36□□□□□ -0.91
NUP54-207ENST00000508583 SPON2Q9BUD6 331 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 CALN1Q9BXU9 219 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 CEP44Q9C0F1 390 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 TMEM245Q9H330 911 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 DNAI1Q9UI46 699 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 VPS51Q9UID3 782 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 HS3ST2Q9Y278 367 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 OR51B4Q9Y5P0 310 aa9.36□□□□□ -0.91
NUP54-207ENST00000508583 ANTXRLA6NF34 631 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 H0Y858 1186 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 ATP9BO43861 1147 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 BUB1BO60566 1050 aaPredicted RBP9.35□□□□□ -0.91
NUP54-207ENST00000508583 CHRM1P11229 460 aaPredicted RBP9.35□□□□□ -0.91
NUP54-207ENST00000508583 ACADMP11310 421 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 ZFXP17010 805 aaPredicted RBP9.35□□□□□ -0.91
NUP54-207ENST00000508583 GOT1P17174 413 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 PRKCHP24723 683 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 IL1R2P27930 398 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 GJC1P36383 396 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 CETN2P41208 172 aa9.35□□□□□ -0.91
NUP54-207ENST00000508583 IRAK1P51617 712 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms