RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 ABATP80404 500 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TRIM32Q13049 653 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PYDC2Q56P42 97 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 CCNYL2Q5T2Q4 361 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 IRF2BP2Q7Z5L9 587 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 HERC6Q8IVU3 1022 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 CACTIN-AS1Q8N1I8 211 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 CNTD1Q8N815 330 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC7A14Q8TBB6 771 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 FAR1Q8WVX9 515 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ITPKCQ96DU7 683 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 FAXDC2Q96IV6 333 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SPON2Q9BUD6 331 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 AP5M1Q9H0R1 490 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 MID1IP1Q9NPA3 183 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TAS2R1Q9NYW7 299 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TJP2Q9UDY2 1190 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 FETUBQ9UGM5 382 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SRP68Q9UHB9 627 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TSR3Q9UJK0 312 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PLLPQ9Y342 182 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TRIM64CA6NLI5 447 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PLK4O00444 970 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ZMPSTE24O75844 475 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 DHFRP00374 187 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SERPINA1P01009 418 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 LINGO3P0C6S8 592 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 UMPSP11172 480 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ATP5F1P24539 256 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 MGAT1P26572 445 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 NAMPTP43490 491 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC18A1P54219 525 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ZSWIM7Q19AV6 140 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF829Q3KNS6 432 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ZBED5Q49AG3 693 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 AADACL2Q6P093 401 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PLET1Q6UQ28 207 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SV2AQ7L0J3 742 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 HPS6Q86YV9 775 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ZDHHC17Q8IUH5 632 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 DENND6AQ8IWF6 608 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SCN4BQ8IWT1 228 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 EPS8L1Q8TE68 723 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 STARD8Q92502 1023 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TMCO6Q96DC7 493 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SMPD3Q9NY59 655 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 MAGEL2Q9UJ55 1249 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 RPS6KA6Q9UK32 745 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TDRKHQ9Y2W6 561 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 JCADQ9P266 1359 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 A0A1W2PPM1 405 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 EME2A4GXA9 379 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 CNPP09543 421 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 HARS2P49590 506 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 LSM3P62310 102 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 HIST2H2ACQ16777 129 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 EARS2Q5JPH6 523 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 LIPMQ5VYY2 423 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 HIST2H2AA3Q6FI13 130 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 FRMD7Q6ZUT3 714 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 EPHX4Q8IUS5 362 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 WDR49Q8IV35 697 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 NLGN1Q8N2Q7 840 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 FNDC5Q8NAU1 212 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 OR2T34Q8NGX1 318 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 OR2T3Q8NH03 318 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PABPC5Q96DU9 382 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PPP1R16BQ96T49 567 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TINF2Q9BSI4 451 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PIGUQ9H490 435 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ACAD9Q9H845 621 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SFMBT1Q9UHJ3 866 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF222Q9UK12 451 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 A0A1W2PQ72 361 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 UBE2QL1A1L167 161 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PCP4L1A6NKN8 68 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 C2orf81A6NN90 581 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SYNCRIPO60506 623 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 LGR5O75473 907 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 GH1P01241 217 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 KDELR1P24390 212 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PHC1P78364 1004 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ECT2LQ008S8 904 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PLIN5Q00G26 463 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 HERC3Q15034 1050 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SLC1A5Q15758 541 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PHKG1Q16816 387 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ZIK1Q3SY52 487 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 NADK2Q4G0N4 442 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ATF7IP2Q5U623 682 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 IER5Q5VY09 327 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ADGRD1Q6QNK2 874 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 PEX5LQ8IYB4 626 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 FBXO39Q8N4B4 442 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 SYTL5Q8TDW5 730 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 RXFP2Q8WXD0 754 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TP53INP1Q96A56 240 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 TMEM143Q96AN5 459 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 HPDLQ96IR7 371 aa7.43□□□□□ -1.22
UBE2D3-224ENST00000508474 ZNF317Q96PQ6 595 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms