RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 CLDN6P56747 220 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 PPP2CBP62714 309 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 RACK1P63244 317 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 PPP2CAP67775 309 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 ECT2LQ008S8 904 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 CENPCQ03188 943 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 PAK1Q13153 545 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 CDH18Q13634 790 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 TTC31Q49AM3 519 aaPredicted RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 FBXL22Q6P050 247 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 TRIM65Q6PJ69 517 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 C14orf80Q86SX3 495 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 GATAD2AQ86YP4 633 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 MMAAQ8IVH4 418 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 DEFB106AQ8N104 65 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 CCAR2Q8N163 923 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 SHC3Q92529 594 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 BTN2A3PQ96KV6 586 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 DDX50Q9BQ39 737 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 THAP9Q9H5L6 903 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 CAAP1Q9H8G2 361 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 POPDC2Q9HBU9 364 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 KIAA1468Q9P260 1216 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 ARHGAP20Q9P2F6 1191 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 HOOK1Q9UJC3 728 aaKnown RBP6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 SARDHQ9UL12 918 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 FZD4Q9ULV1 537 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 SCML1Q9UN30 329 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 OR51B4Q9Y5P0 310 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 MYLKQ15746 1914 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 PTPRQQ9UMZ3 2332 aa6.64□□□□□ -1.35
HMGN1P16-201ENST00000508308 FAM149AA5PLN7 773 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 FAM47DPA6NHR8 397 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 CAPN9O14815 690 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 THAP12O43422 761 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 TNFSF14O43557 240 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 RTN2O75298 545 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 GRAP2O75791 330 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 APOEP02649 317 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 ERBB2P04626 1255 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PNMA6AP0CW24 399 aaPredicted RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PDGFRAP16234 1089 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 GOT1P17174 413 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 TFE3P19532 575 aaPredicted RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PON1P27169 355 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 GNA15P30679 374 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 RDXP35241 583 aaKnown RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 CLCN1P35523 988 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 GGCXP38435 758 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 GRK6P43250 576 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PSMD8P48556 350 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 CCT8P50990 548 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 CCR5P51681 352 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 ADPRHP54922 357 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 TAS2R38P59533 333 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 ST8SIA6P61647 398 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 CETN1Q12798 172 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 AUHQ13825 339 aaKnown RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 TEAD4Q15561 434 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 SMAD1Q15797 465 aaKnown RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 ARHGAP44Q17R89 818 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 C5orf22Q49AR2 442 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PTPN20Q4JDL3 420 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 C19orf48Q6RUI8 117 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 OLFML1Q6UWY5 402 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 FAM183BPQ6ZVS7 135 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 SETXQ7Z333 2677 aaKnown RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 KANSL1Q7Z3B3 1105 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 CHSY1Q86X52 802 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 SPATS2Q86XZ4 545 aaKnown RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PASD1Q8IV76 773 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 ZNF683Q8IZ20 524 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 DOCK4Q8N1I0 1966 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 ZNF557Q8N988 423 aaPredicted RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 OR2T34Q8NGX1 318 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 SAP25Q8TEE9 199 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PPP1R13BQ96KQ4 1090 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 ELF4Q99607 663 aaPredicted RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 CDC6Q99741 560 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 OMDQ99983 421 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 FEM1AQ9BSK4 669 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 CCDC86Q9H6F5 360 aaKnown RBP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 TMPRSS4Q9NRS4 437 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 DKK4Q9UBT3 224 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 RWDD2AQ9UIY3 292 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PPM1HQ9ULR3 514 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 PCDHGC3Q9UN70 934 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 RAXQ9Y2V3 346 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 HS3ST4Q9Y661 456 aa6.63□□□□□ -1.35
HMGN1P16-201ENST00000508308 SYNJ2BP-COX16A0A087WUM0 186 aa6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 A0A1B0GVM2 712 aa6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 TRABD2BA6NFA1 517 aa6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 TCAF2A6NFQ2 919 aa6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 F5H5T6 163 aa6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 FOXN3O00409 490 aaPredicted RBP6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 MED7O43513 233 aa6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 ATP9BO43861 1147 aa6.62□□□□□ -1.35
HMGN1P16-201ENST00000508308 RNASEH1O60930 286 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms