RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	NASP	P49321	788 aa	Predicted RBP	5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	RACK1	P63244	317 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	GAD2	Q05329	585 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	ZNF33A	Q06730	810 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	LMAN2	Q12907	356 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	SURF1	Q15526	300 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	ZNF699	Q32M78	642 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	HSF5	Q4G112	596 aa	Predicted RBP	5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	ZNF385B	Q569K4	471 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	HECTD3	Q5T447	861 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	MEI1	Q5TIA1	1274 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	SPOPL	Q6IQ16	392 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	SHC4	Q6S5L8	630 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	TPGS1	Q6ZTW0	290 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	STXBP4	Q6ZWJ1	553 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	PIP4P1	Q86T03	277 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	ACOT1	Q86TX2	421 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	CACUL1	Q86Y37	369 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	HID1	Q8IV36	788 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	GRAMD1C	Q8IYS0	662 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	FUK	Q8N0W3	1084 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	LILRA2	Q8N149	483 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	MINDY1	Q8N5J2	469 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	XXYLT1	Q8NBI6	393 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	LINC00301	Q8NCQ3	95 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	PDZD8	Q8NEN9	1154 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	CCDC26	Q8TAB7	109 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	PIWIL2	Q8TC59	973 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	PLPPR2	Q96GM1	343 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	KCNC2	Q96PR1	638 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	SMO	Q99835	787 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	MED10	Q9BTT4	135 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	NUSAP1	Q9BXS6	441 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	CAPN10	Q9HC96	672 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	KIAA1586	Q9HCI6	787 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	SLC39A2	Q9NP94	309 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	DMAP1	Q9NPF5	467 aa	Predicted RBP	5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	SPHK2	Q9NRA0	654 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	DNAJC17	Q9NVM6	304 aa	Known RBP	5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	EHD2	Q9NZN4	543 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	TBC1D14	Q9P2M4	693 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	NUDT5	Q9UKK9	219 aa		5.84	□□□□□ -1.47
ATXN3-210	ENST00000507965	ZZEF1	O43149	2961 aa		5.84	□□□□□ -1.48
ATXN3-210	ENST00000507965	ATP8B3	O60423	1300 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	FAM92A	A1XBS5	289 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	TMEM8B	A6NDV4	472 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	WASH3P	C4AMC7	463 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	TAF4	O00268	1085 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	SPTLC2	O15270	562 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	AP5Z1	O43299	807 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	CACNG3	O60359	315 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	TLR5	O60602	858 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	FBXO24	O75426	580 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	SERPINF2	P08697	491 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZDHHC11B	P0C7U3	371 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	CD59	P13987	128 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	TYR	P14679	529 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	PDC	P20941	246 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	ADORA2B	P29275	332 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	NTSR1	P30989	418 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	TUB	P50607	506 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	NDST1	P52848	882 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	MAP3K7CL	P57077	242 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	BIRC3	Q13489	604 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	TRPC3	Q13507	836 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	CUL4B	Q13620	913 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	STK38	Q15208	465 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZNF394	Q53GI3	561 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	ZNF667	Q5HYK9	610 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	SNX30	Q5VWJ9	437 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	PRAMEF13	Q5VWM6	474 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	BTBD8	Q5XKL5	378 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	GRAMD4	Q6IC98	578 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	KIAA1324	Q6UXG2	1013 aa	Known RBP	5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	UNC13D	Q70J99	1090 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	CHPF	Q8IZ52	775 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	CHCHD4	Q8N4Q1	142 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	OXR1	Q8N573	874 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	KIAA1958	Q8N8K9	716 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	C12orf29	Q8N999	325 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	TRIML1	Q8N9V2	468 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	SLC2A14	Q8TDB8	520 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	IPO4	Q8TEX9	1081 aa	Known RBP	5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	OVCA2	Q8WZ82	227 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	SYAP1	Q96A49	352 aa	Predicted RBP	5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	OTUB2	Q96DC9	234 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	SMARCD1	Q96GM5	515 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	MRGPRX1	Q96LB2	322 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	TWNK	Q96RR1	684 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	BBS2	Q9BXC9	721 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	NACA2	Q9H009	215 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	SLC32A1	Q9H598	525 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	UPF2	Q9HAU5	1272 aa	Known RBP	5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	NMUR1	Q9HB89	426 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	PLK2	Q9NYY3	685 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	IL37	Q9NZH6	218 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	DEC1	Q9P2X7	70 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	PPM1H	Q9ULR3	514 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	MSRB2	Q9Y3D2	182 aa		5.83	□□□□□ -1.48
ATXN3-210	ENST00000507965	NEUROG3	Q9Y4Z2	214 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms