RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 LEFTY1O75610 366 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 PON1P27169 355 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 MXI1P50539 228 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 PDE6CP51160 858 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CBX1P83916 185 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 ITGA7Q13683 1181 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 SNX17Q15036 470 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 RASA2Q15283 850 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 MAJINQ3KP22 176 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 ZNF568Q3ZCX4 644 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 SLC27A1Q6PCB7 646 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CACNA2D4Q7Z3S7 1137 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 NLRP14Q86W24 1093 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 HACE1Q8IYU2 909 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 GOLGA6L1Q8N7Z2 621 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 PPP1R14CQ8TAE6 165 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 PIP4K2CQ8TBX8 421 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 ACAP3Q96P50 834 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 MOGAT1Q96PD6 335 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 NAPGQ99747 312 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 LSM14BQ9BX40 385 aaKnown RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 GANQ9H2C0 597 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 FAM207AQ9NSI2 230 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 ARGLU1Q9NWB6 273 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 RBAKQ9NYW8 714 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 AIPL1Q9NZN9 384 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 PCSK1NQ9UHG2 260 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 LAMP5Q9UJQ1 280 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 GUCA1BQ9UMX6 200 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 AREL1O15033 823 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 EPHB6O15197 1021 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 PGK1P00558 417 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 FTLP02792 175 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 VAV1P15498 845 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 FERP16591 822 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 ATP6V1E1P36543 226 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 SLC12A2P55011 1212 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CCDC122Q5T0U0 273 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 DPY19L2P1Q6NXN4 242 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CXCL17Q6UXB2 119 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CRELD2Q6UXH1 353 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CBWD2Q8IUF1 395 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 TTC39CQ8N584 583 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 GPR161Q8N6U8 529 aaKnown RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CEP112Q8N8E3 955 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 FBXL13Q8NEE6 735 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 IPMKQ8NFU5 416 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CAGE1Q8TC20 777 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CCDC42Q96M95 316 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 TSGA13Q96PP4 275 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 FAM213AQ9BRX8 229 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 STK33Q9BYT3 514 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 CDT1Q9H211 546 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 PDZD7Q9H5P4 517 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 RPF1Q9H9Y2 349 aaKnown RBP7.39□□□□□ -1.23
CLCN3-206ENST00000507875 GCNT4Q9P109 453 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 TRIM10Q9UDY6 481 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 B3GALT1Q9Y5Z6 326 aa7.39□□□□□ -1.23
CLCN3-206ENST00000507875 A6NLC8 198 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 LRRIQ3A6PVS8 624 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 AXIN1O15169 862 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 FFAR2O15552 330 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 KRT86O43790 486 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 VTNP04004 478 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 SERPING1P05155 500 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 PCNAP12004 261 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 HOXD12P35452 270 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 PRKCIP41743 596 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 CENPAP49450 140 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 DSC2Q02487 901 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 MGAT3Q09327 533 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TAF12Q16514 161 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 ZACNQ401N2 412 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 CCDC157Q569K6 752 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 C1orf220Q5T0J3 134 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 SFMBT2Q5VUG0 894 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 MBNL2Q5VZF2 373 aaKnown RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 DSTYKQ6XUX3 929 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 ACAD11Q709F0 780 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 KIAA1328Q86T90 577 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 CPOQ8IVL8 374 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 UCMAQ8WVF2 138 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 DNAJB3Q8WWF6 145 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 LENG1Q96BZ8 264 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TCTN2Q96GX1 697 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 INTS2Q9H0H0 1204 aaKnown RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 SEMA6CQ9H3T2 930 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 STARD7Q9NQZ5 370 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 ZNF446Q9NWS9 450 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 A0A1W2PPC1 479 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 APOL1O14791 398 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TIAF1O95411 115 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TNNC2P02585 160 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 C4BPAP04003 597 aaKnown RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 ARF4P18085 180 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 TBXAS1P24557 533 aaPredicted RBP7.38□□□□□ -1.23
CLCN3-206ENST00000507875 STAT1P42224 750 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 ALDH9A1P49189 494 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 MFAP3P55082 362 aa7.38□□□□□ -1.23
CLCN3-206ENST00000507875 YWHAEP62258 255 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms