RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CCDC117Q8IWD4 279 aaPredicted RBP18.04■□□□□ 0.48
SFXN1-208ENST00000507823 ATPAF2Q8N5M1 289 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 SPPL2BQ8TCT7 592 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 SLC39A8Q9C0K1 460 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 IL22Q9GZX6 179 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 PRDM5Q9NQX1 630 aaPredicted RBP18.04■□□□□ 0.48
SFXN1-208ENST00000507823 PPARGC1AQ9UBK2 798 aaKnown RBP18.04■□□□□ 0.48
SFXN1-208ENST00000507823 RPS6KL1Q9Y6S9 549 aa18.04■□□□□ 0.48
SFXN1-208ENST00000507823 EFEMP2O95967 443 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 CCNB1P14635 433 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 MAGEA12P43365 314 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 PSEN1P49768 467 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 OLIG2Q13516 323 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 PRPSAP1Q14558 356 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 MROH9Q5TGP6 573 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 PIK3R6Q5UE93 754 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 NAPEPLDQ6IQ20 393 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 C14orf80Q86SX3 495 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 NPAS4Q8IUM7 802 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 TRIM42Q8IWZ5 723 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 C2orf15Q8WU43 125 aaKnown RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 CPNE1Q99829 537 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 PIH1D1Q9NWS0 290 aaKnown RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 GMIPQ9P107 970 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 IGLV3-10A0A075B6K4 115 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 C2CD2LO14523 706 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 GP5P40197 560 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 TUBP50607 506 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 APLP1P51693 650 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 TTC31Q49AM3 519 aaPredicted RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 ANKRD20A4Q4UJ75 823 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 SDHAF4Q5VUM1 108 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 TIGD7Q6NT04 549 aaPredicted RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 FUT10Q6P4F1 479 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 ARHGAP36Q6ZRI8 547 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 LINC00523Q86TU6 105 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 UMODL1-AS1Q8N2C9 162 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 ZNF296Q8WUU4 475 aaPredicted RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 ZNF419Q96HQ0 510 aaPredicted RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 MCMBPQ9BTE3 642 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 MRPL9Q9BYD2 267 aaKnown RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 IQCGQ9H095 443 aaKnown RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 SOX13Q9UN79 622 aa18.03■□□□□ 0.48
SFXN1-208ENST00000507823 AAR2Q9Y312 384 aaKnown RBP18.03■□□□□ 0.48
SFXN1-208ENST00000507823 MTMR11A4FU01 709 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 BIRC5O15392 142 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 IGLV3-27P01718 113 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 CXCL10P02778 98 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 ALDOAP04075 364 aaKnown RBP18.02■□□□□ 0.48
SFXN1-208ENST00000507823 NCALDP61601 193 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 ACBD5Q5T8D3 534 aaPredicted RBP18.02■□□□□ 0.48
SFXN1-208ENST00000507823 GRTP1Q5TC63 336 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 ARMC3Q5W041 872 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 KYAT3Q6YP21 454 aaKnown RBP18.02■□□□□ 0.48
SFXN1-208ENST00000507823 ATAD1Q8NBU5 361 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.02■□□□□ 0.48
SFXN1-208ENST00000507823 OLA1Q9NTK5 396 aaKnown RBP18.02■□□□□ 0.48
SFXN1-208ENST00000507823 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.02■□□□□ 0.48
SFXN1-208ENST00000507823 PSAT1Q9Y617 370 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 CFAP73A6NFT4 308 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 ZDHHC11BP0C7U3 371 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 YWHAQP27348 245 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 GATMP50440 423 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 CDH17Q12864 832 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 TRIP4Q15650 581 aaPredicted RBP18.02■□□□□ 0.48
SFXN1-208ENST00000507823 FYB2Q5VWT5 728 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 NDUFAF2Q8N183 169 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 TTC9BQ8N6N2 239 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 KIFC1Q9BW19 673 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 TSSK1BQ9BXA7 367 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 NOL6Q9H6R4 1146 aaKnown RBP18.02■□□□□ 0.48
SFXN1-208ENST00000507823 GLOD4Q9HC38 313 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 SLC40A1Q9NP59 571 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 NDFIP2Q9NV92 336 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 CHKBQ9Y259 395 aa18.02■□□□□ 0.48
SFXN1-208ENST00000507823 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.02■□□□□ 0.47
SFXN1-208ENST00000507823 WDR91A4D1P6 747 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 H0YHG0 523 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 H7C4K7 107 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 USP12O75317 370 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 DCTN3O75935 186 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 GALTP07902 379 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 ITGA2BP08514 1039 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 HAPLN1P10915 354 aaPredicted RBP18.02■□□□□ 0.47
SFXN1-208ENST00000507823 TBX4P57082 545 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 CEP295NLQ96MC4 621 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 PAK6Q9NQU5 681 aaPredicted RBP18.02■□□□□ 0.47
SFXN1-208ENST00000507823 NUDT5Q9UKK9 219 aa18.02■□□□□ 0.47
SFXN1-208ENST00000507823 DFFAO00273 331 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 ANXA9O76027 345 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 TROVE2P10155 538 aaKnown RBP eCLIP18.01■□□□□ 0.47
SFXN1-208ENST00000507823 RHOQP17081 205 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 ALDH3A1P30838 453 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 NDST2P52849 883 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 TNK2Q07912 1038 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 INSCQ1MX18 579 aa18.01■□□□□ 0.47
SFXN1-208ENST00000507823 FAM133BQ5BKY9 247 aaKnown RBP18.01■□□□□ 0.47
SFXN1-208ENST00000507823 RSPO2Q6UXX9 243 aaPredicted RBP18.01■□□□□ 0.47
SFXN1-208ENST00000507823 RASSF3Q86WH2 238 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms