RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 RPS6KL1Q9Y6S9 549 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 MATN3O15232 486 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 CACNG3O60359 315 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 RFPL1O75677 317 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 ALDH7A1P49419 539 aaKnown RBP22.69■■□□□ 1.22
RNF4-207ENST00000506706 BMPR2Q13873 1038 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 C10orf120Q5SQS8 335 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 CGB2Q6NT52 195 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 LRRC49Q8IUZ0 686 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 SPOCK2Q92563 424 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 ZNF75CPQ92670 426 aaPredicted RBP22.69■■□□□ 1.22
RNF4-207ENST00000506706 PLCD4Q9BRC7 762 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 IQCGQ9H095 443 aaKnown RBP22.69■■□□□ 1.22
RNF4-207ENST00000506706 PHTF1Q9UMS5 762 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 ARL2BPQ9Y2Y0 163 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 STARD13Q9Y3M8 1113 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 CDY1Q9Y6F8 540 aa22.69■■□□□ 1.22
RNF4-207ENST00000506706 AP3B1O00203 1094 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 UPP2O95045 317 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 TBX18O95935 607 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 MAGEA9P43362 315 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 NPY2RP49146 381 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 RASIP1Q5U651 963 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 NAPEPLDQ6IQ20 393 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 ZNF449Q6P9G9 518 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 OTOP3Q7RTS5 596 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 FBXO22Q8NEZ5 403 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 BTN2A3PQ96KV6 586 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 IL12RB2Q99665 862 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 C12orf65Q9H3J6 166 aaKnown RBP22.68■■□□□ 1.22
RNF4-207ENST00000506706 MARCH2Q9P0N8 246 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 AAR2Q9Y312 384 aaKnown RBP22.68■■□□□ 1.22
RNF4-207ENST00000506706 GREB1Q4ZG55 1949 aa22.68■■□□□ 1.22
RNF4-207ENST00000506706 CCNFP41002 786 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 TLE2Q04725 743 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 MGAT5Q09328 741 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 PSMD5Q16401 504 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 MS4A13Q5J8X5 152 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 MROH9Q5TGP6 573 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.67■■□□□ 1.22
RNF4-207ENST00000506706 KLHDC8BQ8IXV7 354 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 TOX2Q96NM4 488 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 UBP1Q9NZI7 540 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 PPARGC1AQ9UBK2 798 aaKnown RBP22.67■■□□□ 1.22
RNF4-207ENST00000506706 MICAL3Q7RTP6 2002 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 DHRS4L1P0CG22 281 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 RHOQP17081 205 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 ETV4P43268 484 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 LIG3P49916 1009 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 USP41Q3LFD5 358 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 TRIM60Q495X7 471 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 LACTB2Q53H82 288 aaPredicted RBP22.67■■□□□ 1.22
RNF4-207ENST00000506706 TIFABQ6ZNK6 161 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 TRPM8Q7Z2W7 1104 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 LINC00523Q86TU6 105 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 MIB1Q86YT6 1006 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 ZNF683Q8IZ20 524 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 CNPY4Q8N129 248 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 CERS2Q96G23 380 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 FAM111AQ96PZ2 611 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 FCRL5Q96RD9 977 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 SRPK1Q96SB4 655 aaKnown RBP22.67■■□□□ 1.22
RNF4-207ENST00000506706 ZYG11BQ9C0D3 744 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 PRDM5Q9NQX1 630 aaPredicted RBP22.67■■□□□ 1.22
RNF4-207ENST00000506706 MKS1Q9NXB0 559 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 DONSONQ9NYP3 566 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 PRKAG3Q9UGI9 489 aa22.67■■□□□ 1.22
RNF4-207ENST00000506706 MAGEB16A2A368 324 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 HMX2A2RU54 273 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 WDR91A4D1P6 747 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 EDF1O60869 148 aaKnown RBP22.66■■□□□ 1.22
RNF4-207ENST00000506706 PAPOLAP51003 745 aaKnown RBP22.66■■□□□ 1.22
RNF4-207ENST00000506706 CDH17Q12864 832 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 IKBKEQ14164 716 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 CES3Q6UWW8 571 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 TMEM135Q86UB9 458 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 RASSF3Q86WH2 238 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 ZNF276Q8N554 614 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 GIPC2Q8TF65 315 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 FCRL3Q96P31 734 aaPredicted RBP22.66■■□□□ 1.22
RNF4-207ENST00000506706 PPP1R2P1Q96PQ5 205 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 ACTR5Q9H9F9 607 aaPredicted RBP22.66■■□□□ 1.22
RNF4-207ENST00000506706 GLOD4Q9HC38 313 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 SLCO1B3Q9NPD5 702 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 MRPL42Q9Y6G3 142 aaKnown RBP22.66■■□□□ 1.22
RNF4-207ENST00000506706 SLC12A8A0AV02 714 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 SLC38A8A6NNN8 435 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 ANXA9O76027 345 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 USP1O94782 785 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 DNAJB2P25686 324 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 PACS1Q6VY07 963 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 CHSY1Q86X52 802 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 ZNF669Q96BR6 464 aaPredicted RBP22.66■■□□□ 1.22
RNF4-207ENST00000506706 IL22Q9GZX6 179 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 ZFATQ9P243 1243 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 KLHL14Q9P2G3 628 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 MTRRQ9UBK8 725 aa22.66■■□□□ 1.22
RNF4-207ENST00000506706 NYNRINQ9P2P1 1898 aaKnown RBP22.65■■□□□ 1.22
RNF4-207ENST00000506706 EFEMP2O95967 443 aa22.65■■□□□ 1.22
RNF4-207ENST00000506706 ZDHHC11BP0C7U3 371 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms