RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ATP9BO43861 1147 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 OPHN1O60890 802 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 CNTN5O94779 1100 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 ATP1A3P13637 1013 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 CD59P13987 128 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 VAV1P15498 845 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 RDXP35241 583 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 STAT1P42224 750 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 UBXN1Q04323 297 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 GRIK2Q13002 908 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF177Q13360 481 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 ELAVL3Q14576 367 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 ACBD5Q5T8D3 534 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 RNF219Q5W0B1 726 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 SND1Q7KZF4 910 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 SETD3Q86TU7 594 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 MMAAQ8IVH4 418 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 PARP9Q8IXQ6 854 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 AOPEPQ8N6M6 819 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 EMC1Q8N766 993 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 ANKRD20A12PQ8NF67 263 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 NEK11Q8NG66 645 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 OR2I1PQ8NGU4 316 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM131CQ96AQ9 280 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 CFAP57Q96MR6 1250 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 HAPLN3Q96S86 360 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 PPP1R9BQ96SB3 815 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 PCDHB18PQ96TA0 734 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 PSMB7Q99436 277 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 BPIFA3Q9BQP9 254 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 GTPBP2Q9BX10 602 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 ZDHHC5Q9C0B5 715 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 SIK2Q9H0K1 926 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 METTL5Q9NRN9 209 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 TMPRSS4Q9NRS4 437 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 FZD4Q9ULV1 537 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 WASF3Q9UPY6 502 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 PAXBP1Q9Y5B6 917 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 SNX10Q9Y5X0 201 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 TCRBV5S1A1TA0A578 114 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 C2CD4BA6NLJ0 364 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 E9PAM4 449 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 RNASEH1O60930 286 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 ADH1BP00325 375 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 IGHV4-34P06331 123 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 CDK11BP21127 795 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 C5AR1P21730 350 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 CD27P26842 260 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 DRD3P35462 400 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 NNMTP40261 264 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 PTPN9P43378 593 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 ATXN3P54252 364 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 GALCP54803 685 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 NRG1Q02297 640 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF252P-AS1Q0IIN9 211 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 SLC14A1Q13336 389 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 CLEC16AQ2KHT3 1053 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 CCDC14Q49A88 953 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 ANO6Q4KMQ2 910 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 RAB6CQ53S08 254 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM131BQ86XD5 332 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 PHF13Q86YI8 300 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 STK40Q8N2I9 435 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 SH2D3CQ8N5H7 860 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 AADATQ8N5Z0 425 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 DEFB124Q8NES8 71 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 JOSD2Q8TAC2 188 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 SLC30A5Q8TAD4 765 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 CENPIQ92674 756 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 BIRC7Q96CA5 298 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 C11orf70Q9BRQ4 267 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 SYT11Q9BT88 431 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 FUCA2Q9BTY2 467 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 RAB6CQ9H0N0 254 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 MIR1-1HGQ9H1L0 117 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 NEUROG2Q9H2A3 272 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 FBXL12Q9NXK8 326 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 HS3ST2Q9Y278 367 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 CABIN1Q9Y6J0 2220 aa9.32□□□□□ -0.92
PDLIM5-209ENST00000506632 USP24Q9UPU5 2620 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 A0A1W2PP55 124 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 ALOX15BO15296 676 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 TEX33O43247 280 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF883P0CG24 379 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 SRCP12931 536 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 SLC8A1P32418 973 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 GRIA4P48058 902 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 PSMD8P48556 350 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 NUMBP49757 651 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 AFF3P51826 1226 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 SFSWAPQ12872 951 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 DLG2Q15700 870 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 C15orf59Q2T9L4 293 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 MANEALQ5VSG8 457 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 KIAA0895LQ68EN5 471 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 NCEH1Q6PIU2 408 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 LRRC31Q6UY01 552 aa9.31□□□□□ -0.92
PDLIM5-209ENST00000506632 MON1BQ7L1V2 547 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms