RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SGSM3Q96HU1 749 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 ABCF3Q9NUQ8 709 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 TBX21Q9UL17 535 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 RPS6KL1Q9Y6S9 549 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 IQANK1A0A1B0GTG1 560 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 NCAM2O15394 837 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 SPAG6O75602 509 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 GJB5O95377 273 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 ACRP10323 421 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 MAXP61244 160 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 IHHQ14623 411 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 STEAP4Q687X5 459 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 NADSYN1Q6IA69 706 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 FBXL22Q6P050 247 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 RTL3Q8N8U3 475 aaKnown RBP12.46□□□□□ -0.41
LIN54-206ENST00000506560 CCDC197Q8NCU1 140 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 ATXN7L3BQ96GX2 97 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 AGAP2Q99490 1192 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 CLSTN3Q9BQT9 956 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 MECRQ9BV79 373 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 PPCSQ9HAB8 311 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 CHRAC1Q9NRG0 131 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 SENP1Q9P0U3 644 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 SMG5Q9UPR3 1016 aaKnown RBP12.46□□□□□ -0.41
LIN54-206ENST00000506560 ACTL7AQ9Y615 435 aa12.46□□□□□ -0.41
LIN54-206ENST00000506560 DOCK6Q96HP0 2047 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 SLC38A8A6NNN8 435 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 TRDMT1O14717 391 aaKnown RBP12.46□□□□□ -0.42
LIN54-206ENST00000506560 TLR5O60602 858 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 LPXNO60711 386 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 CSPG5O95196 566 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 EFEMP2O95967 443 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 OAS1P00973 400 aaKnown RBP12.46□□□□□ -0.42
LIN54-206ENST00000506560 MLNP12872 115 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 NEK3P51956 506 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 SARNPP82979 210 aaKnown RBP12.46□□□□□ -0.42
LIN54-206ENST00000506560 IL9RQ01113 521 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 MGAT5Q09328 741 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 NIPAL4Q0D2K0 466 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 HHATQ5VTY9 493 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 RFWD3Q6PCD5 774 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 ANKS3Q6ZW76 656 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 SPPL2BQ8TCT7 592 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 ZNF669Q96BR6 464 aaPredicted RBP12.46□□□□□ -0.42
LIN54-206ENST00000506560 HMCESQ96FZ2 354 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 IGSF21Q96ID5 467 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 RMDN2Q96LZ7 410 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 TRIM62Q9BVG3 475 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 MRPL9Q9BYD2 267 aaKnown RBP12.46□□□□□ -0.42
LIN54-206ENST00000506560 PRDM5Q9NQX1 630 aaPredicted RBP12.46□□□□□ -0.42
LIN54-206ENST00000506560 TMEM39AQ9NV64 488 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 PCMTD2Q9NV79 361 aa12.46□□□□□ -0.42
LIN54-206ENST00000506560 CSF2RAP15509 400 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 DNAJB2P25686 324 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 ETV4P43268 484 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 CHRNA4P43681 627 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 CDK16Q00536 496 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 LRRC26Q2I0M4 334 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 TTC39BQ5VTQ0 682 aaPredicted RBP12.45□□□□□ -0.42
LIN54-206ENST00000506560 CFAP52Q8N1V2 620 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 PNPLA1Q8N8W4 532 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 IPMKQ8NFU5 416 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 WBP2Q969T9 261 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 FERMT1Q9BQL6 677 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 TMEM175Q9BSA9 504 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 CASS4Q9NQ75 786 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 SAMD15Q9P1V8 674 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 ALDH1A2O94788 518 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 PGAM1P18669 254 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 SLC18A2Q05940 514 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 SPOUT1Q5T280 376 aaKnown RBP12.45□□□□□ -0.42
LIN54-206ENST00000506560 CES4AQ5XG92 561 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 CATSPERBQ9H7T0 1116 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 TLR8Q9NR97 1041 aaKnown RBP12.45□□□□□ -0.42
LIN54-206ENST00000506560 RAD54BQ9Y620 910 aa12.45□□□□□ -0.42
LIN54-206ENST00000506560 PRRC2BQ5JSZ5 2229 aaKnown RBP12.45□□□□□ -0.42
LIN54-206ENST00000506560 ZCWPW2A0A1B0GU75 182 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 HOXA2O43364 376 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 PMPCBO75439 489 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 SUN1O94901 812 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 PEX11BO96011 259 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 SNRPAP09012 282 aaKnown RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 NMBRP28336 390 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 IRX4P78413 519 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 PDK4Q16654 411 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 AFMIDQ63HM1 303 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 ACVR1CQ8NER5 493 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 OR52K2Q8NGK3 314 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 TTC17Q96AE7 1141 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 APOPT1Q96IL0 206 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 PAWRQ96IZ0 340 aaKnown RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 SRPK1Q96SB4 655 aaKnown RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 BEGAINQ9BUH8 593 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 RBM22Q9NW64 420 aaKnown RBP eCLIP12.44□□□□□ -0.42
LIN54-206ENST00000506560 MTRRQ9UBK8 725 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 IPO11Q9UI26 975 aaKnown RBP12.44□□□□□ -0.42
LIN54-206ENST00000506560 C5orf42Q9H799 3197 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 CCNCP24863 283 aa12.44□□□□□ -0.42
LIN54-206ENST00000506560 SLC6A4P31645 630 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms