RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ST8SIA6P61647 398 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 YWHAEP62258 255 aaKnown RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 LSM11P83369 360 aaKnown RBP eCLIP6.04□□□□□ -1.44
GYPB-205ENST00000505583 ECT2LQ008S8 904 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 SEMG2Q02383 582 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 APBA1Q02410 837 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 CENPCQ03188 943 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 LRRC63Q05C16 580 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 EIF4EBP2Q13542 120 aaPredicted RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 POM121L1PQ3SYA9 428 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 HES3Q5TGS1 186 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 CXorf57Q6NSI4 855 aaKnown RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 TTI2Q6NXR4 508 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 FBXL19Q6PCT2 694 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 LAPTM4BQ86VI4 370 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 TMPRSS12Q86WS5 348 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 SLC25A45Q8N413 288 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 OR14C36Q8NHC7 312 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 FRS2Q8WU20 508 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 FAM131CQ96AQ9 280 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 FAM149B1Q96BN6 582 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 ALG14Q96F25 216 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 SERAC1Q96JX3 654 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 HSFY1Q96LI6 401 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 GSDMAQ96QA5 445 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 TSG101Q99816 390 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 PRMT1Q99873 361 aaKnown RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 IRX2Q9BZI1 471 aaPredicted RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 SCAND2PQ9GZW5 306 aaPredicted RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 METTL14Q9HCE5 456 aaKnown RBP6.04□□□□□ -1.44
GYPB-205ENST00000505583 ST7Q9NRC1 585 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 MAN1B1Q9UKM7 699 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 FZD4Q9ULV1 537 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 SCML1Q9UN30 329 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 CNTN6Q9UQ52 1028 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 PCDHGA1Q9Y5H4 931 aa6.04□□□□□ -1.44
GYPB-205ENST00000505583 GCN1Q92616 2671 aaKnown RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3DA0A087WVF3 549 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3IA0A087WXS9 549 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3EA0A087X179 549 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3KA0A087X1G2 549 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3FA6NER0 549 aaPredicted RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 LRRC72A6NJI9 287 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 POM121CA8CG34 1229 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 BECN2A8MW95 431 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 KCNU1A8MYU2 1149 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3LB9A6J9 549 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 I6L893 689 aaPredicted RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 TK2O00142 265 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 PMM2O15305 246 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 DFNA5O60443 496 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 RNASEH1O60930 286 aaKnown RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 RFPL3O75679 317 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 FBXO21O94952 628 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TRUB2O95900 331 aaKnown RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3HP0C7X1 549 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 MYF5P13349 255 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 ABCB4P21439 1286 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 EIF2S3P41091 472 aaKnown RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 TAS2R38P59533 333 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 YWHAZP63104 245 aaKnown RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 GCNT1Q02742 428 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 GUCA2AQ02747 115 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 CNTN1Q12860 1018 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 NNTQ13423 1086 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 ELAVL3Q14576 367 aaKnown RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 CCDC40Q4G0X9 1142 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 AGBL4Q5VU57 503 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3GQ6DHY5 549 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3CQ6IPX1 549 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 NAPEPLDQ6IQ20 393 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 KLHL10Q6JEL2 608 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 GJB7Q6PEY0 223 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 ADGRD1Q6QNK2 874 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 SND1Q7KZF4 910 aaKnown RBP eCLIP6.03□□□□□ -1.445e-6■■■□□ 15.5
GYPB-205ENST00000505583 C14orf80Q86SX3 495 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TMEM110Q86TL2 294 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 CHSY1Q86X52 802 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TRIM59Q8IWR1 403 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 TBC1D3Q8IZP1 549 aaPredicted RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 CCAR2Q8N163 923 aaKnown RBP6.03□□□□□ -1.44
GYPB-205ENST00000505583 WDTC1Q8N5D0 677 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 MFSD2AQ8NA29 543 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 KDM1BQ8NB78 822 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 EHBP1Q8NDI1 1231 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 ZNF606Q8WXB4 792 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 KLK6Q92876 244 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 SMARCE1Q969G3 411 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 BTN2A3PQ96KV6 586 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 SERPINB11Q96P15 392 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 MYOCQ99972 504 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 PRORYQ9H606 182 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 ANLNQ9NQW6 1124 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 GDF3Q9NR23 364 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 RMND1Q9NWS8 449 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 PPM1HQ9ULR3 514 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 CEP83Q9Y592 693 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 OR51B4Q9Y5P0 310 aa6.03□□□□□ -1.44
GYPB-205ENST00000505583 SYNJ2BP-COX16A0A087WUM0 186 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms