RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 NCEH1Q6PIU2 408 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 KIAA1324Q6UXG2 1013 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 PTCHD4Q6ZW05 846 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 GLCCI1Q86VQ1 547 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 MON1AQ86VX9 555 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 VSIG1Q86XK7 387 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 FRMD1Q8N878 549 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 CNOT9Q92600 299 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 KCNJ9Q92806 393 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 SMARCE1Q969G3 411 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 FKBP10Q96AY3 582 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 NACC2Q96BF6 587 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 FAM149B1Q96BN6 582 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 KLHL29Q96CT2 875 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 PIP5K1AQ99755 562 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 ALG8Q9BVK2 526 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 TTYH1Q9H313 450 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 EPHX3Q9H6B9 360 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 TTC12Q9H892 705 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 KAT14Q9H8E8 782 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 TLR8Q9NR97 1041 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 SNX15Q9NRS6 342 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 PARPBPQ9NWS1 579 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 MTMR4Q9NYA4 1195 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZNF70Q9UC06 446 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 KLQ9UEF7 1012 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 CCNL1Q9UK58 526 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZNF711Q9Y462 761 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 PCDHB2Q9Y5E7 798 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 TTC36A6NLP5 189 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 TTC34A8MYJ7 566 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 CES2O00748 559 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 FYB1O15117 783 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 TGFB1I1O43294 461 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 TBCAO75347 108 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 CDKL5O76039 1030 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 NXPH3O95157 252 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 PGM3O95394 542 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 CHRM4P08173 479 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 HSP90AB1P08238 724 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 CLTBP09497 229 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 PEPDP12955 493 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 ARSAP15289 507 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 CPOXP36551 454 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 TPTEP56180 551 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 EFNB1P98172 346 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 CRHR2Q13324 411 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 BYSLQ13895 437 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMEM266Q2M3C6 531 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 SLC9B1Q4ZJI4 515 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 SARM1Q6SZW1 724 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 PCSK4Q6UW60 755 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 SLC39A5Q6ZMH5 540 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 Q6ZRM9 215 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 FAM83HQ6ZRV2 1179 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 MAVSQ7Z434 540 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 ADGRF2Q8IZF7 708 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 WDTC1Q8N5D0 677 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 BEND2Q8NDZ0 799 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 NEK9Q8TD19 979 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 RAB40AQ8WXH6 277 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 TEX101Q9BY14 249 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 TRIM31Q9BZY9 425 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 SH2D4AQ9H788 454 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZNF703Q9H7S9 590 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZWILCHQ9H900 591 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 SAP30LQ9HAJ7 183 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 SLC22A11Q9NSA0 550 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 ARGLU1Q9NWB6 273 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 IL1RAPL1Q9NZN1 696 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 SLCO3A1Q9UIG8 710 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 CDH22Q9UJ99 828 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 SLC25A13Q9UJS0 675 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 AMFRQ9UKV5 643 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 GABRQQ9UN88 632 aa4.16□□□□□ -1.74
TRAPPC13-208ENST00000505553 A0A1W2PQM1 296 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 NPIPB13A6NJU9 1138 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 MARCH11A6NNE9 402 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 NPIPB5A8MRT5 1133 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 AHRRA9YTQ3 701 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 NPIPB4C9JG80 1138 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 PER2O15055 1255 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 GJB3O75712 270 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 IL6RP08887 468 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 RARGP13631 454 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZNF8P17098 575 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 AVPR2P30518 371 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 GCH1P30793 250 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 LMAN1P49257 510 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 SCNN1GP51170 649 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 HNRNPMP52272 730 aaKnown RBP eCLIP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 JAK3P52333 1124 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 OAZ1P54368 228 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 PDE1AP54750 535 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 OLR1P78380 273 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 DEUP1Q05D60 604 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMEM115Q12893 351 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 RESTQ13127 1097 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 BMPR2Q13873 1038 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms