RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 CDH22Q9UJ99 828 aa3.81□□□□□ -1.8
HMGB1P22-201ENST00000505315 TUBE1Q9UJT0 475 aa3.81□□□□□ -1.8
HMGB1P22-201ENST00000505315 NDRG4Q9ULP0 352 aaKnown RBP3.81□□□□□ -1.8
HMGB1P22-201ENST00000505315 COG5Q9UP83 839 aa3.81□□□□□ -1.8
HMGB1P22-201ENST00000505315 SORCS3Q9UPU3 1222 aa3.81□□□□□ -1.8
HMGB1P22-201ENST00000505315 SH3BP1Q9Y3L3 701 aa3.81□□□□□ -1.8
HMGB1P22-201ENST00000505315 ANGPTL3Q9Y5C1 460 aa3.81□□□□□ -1.8
HMGB1P22-201ENST00000505315 CAPN7Q9Y6W3 813 aa3.81□□□□□ -1.8
HMGB1P22-201ENST00000505315 PNPLA7Q6ZV29 1317 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SYNRGQ9UMZ2 1314 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 CCDC151A5D8V7 595 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 RGSL1A5PLK6 1076 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 DNM1LO00429 736 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SCAMP1O15126 338 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 LDLRAD4O15165 306 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ZNF185O15231 689 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ASAP2O43150 1006 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 LIASO43766 372 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 CEP104O60308 925 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SMPD2O60906 423 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 OR2C1O95371 312 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 GALTP07902 379 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SUPT20HL2P0C7V6 817 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 CYP4B1P13584 511 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 CD19P15391 556 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ZNF8P17098 575 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 TMEM11P17152 192 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 GABRB1P18505 474 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 HSPA4P34932 840 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 IL13P35225 146 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 BMPR1AP36894 532 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 PSMC4P43686 418 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 CAMPP49913 170 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 GNAQP50148 359 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 GALCP54803 685 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ARF5P84085 180 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 NIPAL4Q0D2K0 466 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 RALGDSQ12967 914 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 BYSLQ13895 437 aaKnown RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 WSCD2Q2TBF2 565 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 FAM214AQ32MH5 1076 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SUPT20HL1Q3ZLR7 823 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 NRN1LQ496H8 165 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ZNF667Q5HYK9 610 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 NOMO2Q5JPE7 1267 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 COLEC12Q5KU26 742 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 C6orf163Q5TEZ5 329 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ETFRF1Q6IPR1 90 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 HMBOX1Q6NT76 420 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 EFCAB12Q6NXP0 572 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ISLR2Q6UXK2 745 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ZNF574Q6ZN55 896 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 MSANTD1Q6ZTZ1 278 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 LARP4Q71RC2 724 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ERN2Q76MJ5 926 aaKnown RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 WFDC3Q8IUB2 231 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 GHDCQ8N2G8 530 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 FIBINQ8TAL6 211 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 BCAS4Q8TDM0 211 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 DUSP19Q8WTR2 217 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 TEKT4Q8WW24 435 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SEPT1Q8WYJ6 367 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 PRCCQ92733 491 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 MR1Q95460 341 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SYAP1Q96A49 352 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 VPS50Q96JG6 964 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 FAM84AQ96KN4 292 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 HS6ST2Q96MM7 605 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 MGME1Q9BQP7 344 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 C17orf80Q9BSJ5 609 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 PIMREGQ9BSJ6 248 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 NPLQ9BXD5 320 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 TRIM31Q9BZY9 425 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 DPH5Q9H2P9 285 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 HRH4Q9H3N8 390 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SMOC2Q9H3U7 446 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 IL1RAPL2Q9NP60 686 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 RXFP3Q9NSD7 469 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 AATFQ9NY61 560 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 OGFRQ9NZT2 677 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SH3BP4Q9P0V3 963 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 DLGAP2Q9P1A6 1054 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 ACTR3BQ9P1U1 418 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 KLQ9UEF7 1012 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 FETUBQ9UGM5 382 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 VPS51Q9UID3 782 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 CD207Q9UJ71 328 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 SERTAD3Q9UJW9 196 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 INTS6Q9UL03 887 aaKnown RBP3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 VPS4AQ9UN37 437 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 AURKCQ9UQB9 309 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 CHKBQ9Y259 395 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 KCNK7Q9Y2U2 307 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 KIF3AQ9Y496 699 aa3.8□□□□□ -1.8
HMGB1P22-201ENST00000505315 IGSF1Q8N6C5 1336 aa3.79□□□□□ -1.8
HMGB1P22-201ENST00000505315 LOC100509620A0A075B734 347 aa3.79□□□□□ -1.8
HMGB1P22-201ENST00000505315 LOC105369274A0A096LPK9 316 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms