RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	CELF6	Q96J87	481 aa	Known RBP	13.32	□□□□□ -0.28
MATR3-233	ENST00000504203	TSGA13	Q96PP4	275 aa		13.32	□□□□□ -0.28
MATR3-233	ENST00000504203	AGAP2	Q99490	1192 aa		13.32	□□□□□ -0.28
MATR3-233	ENST00000504203	COPG2	Q9UBF2	871 aa		13.32	□□□□□ -0.28
MATR3-233	ENST00000504203	DSE	Q9UL01	958 aa		13.32	□□□□□ -0.28
MATR3-233	ENST00000504203	IRAK2	O43187	625 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	ENTPD5	O75356	428 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	LYPLA1	O75608	230 aa	Predicted RBP	13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SERPINE1	P05121	402 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	PAX3	P23760	479 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	GMPR	P36959	345 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SLC1A6	P48664	564 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	TUBB3	Q13509	450 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	FSTL4	Q6MZW2	842 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SAPCD2	Q86UD0	394 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	C10orf107	Q8IVU9	208 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	PPP1R14C	Q8TAE6	165 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	TTC8	Q8TAM2	541 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	HASPIN	Q8TF76	798 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	NUDCD1	Q96RS6	583 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	EBF4	Q9BQW3	602 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	TRIM62	Q9BVG3	475 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	CCDC106	Q9BWC9	280 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	IL22	Q9GZX6	179 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SPC25	Q9HBM1	224 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SOX13	Q9UN79	622 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SEPT4	O43236	478 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	ATP9B	O43861	1147 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	ITGB1	P05556	798 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SERPINA6	P08185	405 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SLC10A3	P09131	477 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	GRK2	P25098	689 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	HOXC13	P31276	330 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	ARRB2	P32121	409 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SERPINB8	P50452	374 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	LPIN1	Q14693	890 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	MAPRE1	Q15691	268 aa	Known RBP	13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	MFSD14C	Q5VZR4	134 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	OVOS1	Q6IE37	1185 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	CLEC14A	Q86T13	490 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	ARHGAP12	Q8IWW6	846 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	AZIN2	Q96A70	460 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	SORT1	Q99523	831 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	ADAM2	Q99965	735 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	APOL2	Q9BQE5	337 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	CHRAC1	Q9NRG0	131 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	ZNF358	Q9NW07	568 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	GABRQ	Q9UN88	632 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	DNAJC16	Q9Y2G8	782 aa		13.31	□□□□□ -0.28
MATR3-233	ENST00000504203	TNFRSF10B	O14763	440 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	ASGR1	P07306	291 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	CSE1L	P55060	971 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	COG7	P83436	770 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	CDH17	Q12864	832 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	CCDC153	Q494R4	210 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	HSP90AA5P	Q58FG0	334 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	BRMS1L	Q5PSV4	323 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	MANEAL	Q5VSG8	457 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	NAPEPLD	Q6IQ20	393 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	KCNMB4	Q86W47	210 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	WDR75	Q8IWA0	830 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	PLD6	Q8N2A8	252 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	TEX9	Q8N6V9	391 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	RNF34	Q969K3	372 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	SUSD3	Q96L08	255 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	UROC1	Q96N76	676 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	HAPLN3	Q96S86	360 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	ARHGAP39	Q9C0H5	1083 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	STN1	Q9H668	368 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	UBP1	Q9NZI7	540 aa		13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-233	ENST00000504203	AP3B1	O00203	1094 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	RPSA	P08865	295 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	TPH1	P17752	444 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	CCNC	P24863	283 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	DNAJB2	P25686	324 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	HARS2	P49590	506 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	CSRP3	P50461	194 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	CDK7	P50613	346 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	TRIM32	Q13049	653 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	TBCC	Q15814	346 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	KHDC1	Q4VXA5	237 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	ARHGAP36	Q6ZRI8	547 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	OTOP3	Q7RTS5	596 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	ZNF598	Q86UK7	904 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	KIFC1	Q9BW19	673 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	DCLRE1B	Q9H816	532 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	ABCC13	Q9NSE7	274 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	SORCS3	Q9UPU3	1222 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	CEP350	Q5VT06	3117 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203		B2RBV5	119 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203		F8W810	466 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	INPPL1	O15357	1258 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	PSMD3	O43242	534 aa		13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	ENO1	P06733	434 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-233	ENST00000504203	F7	P08709	466 aa	Predicted RBP	13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms