RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	SLC7A3	Q8WY07	619 aa		18.2	■□□□□ 0.5
POLR2J3-209	ENST00000504157	HPS1	Q92902	700 aa		18.2	■□□□□ 0.5
POLR2J3-209	ENST00000504157	LHX5	Q9H2C1	402 aa		18.2	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SEMA6A	Q9H2E6	1030 aa		18.2	■□□□□ 0.5
POLR2J3-209	ENST00000504157	COG4	Q9H9E3	785 aa		18.2	■□□□□ 0.5
POLR2J3-209	ENST00000504157	FEM1B	Q9UK73	627 aa		18.2	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PCDHA11	Q9Y5I1	949 aa		18.2	■□□□□ 0.5
POLR2J3-209	ENST00000504157	NRXN2	Q9P2S2	1712 aa		18.2	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ICAM1	P05362	532 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CD1E	P15812	388 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	RPL10	P27635	214 aa	Known RBP	18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ACOT2	P49753	483 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	RFTN1	Q14699	578 aa	Predicted RBP	18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SF3B4	Q15427	424 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PTPN20	Q4JDL3	420 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	AGAP7P	Q5VUJ5	663 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	MCF2L2	Q86YR7	1114 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PDPR	Q8NCN5	879 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ATP6V1E2	Q96A05	226 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CLIP3	Q96DZ5	547 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CEP170P1	Q96L14	293 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SIGLEC10	Q96LC7	697 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ALPK1	Q96QP1	1244 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PDZD7	Q9H5P4	517 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SIAE	Q9HAT2	523 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SACM1L	Q9NTJ5	587 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	MOCS1	Q9NZB8	636 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	TCEAL9	Q9UHQ7	104 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	VPS51	Q9UID3	782 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	DAPK2	Q9UIK4	370 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PCDHAC2	Q9Y5I4	1007 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ANKRD34B	A5PLL1	514 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SLC22A2	O15244	555 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	AKAP10	O43572	662 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	STBD1	O95210	358 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SERPINB5	P36952	375 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	DPP6	P42658	865 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SOX10	P56693	466 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	YWHAE	P62258	255 aa	Known RBP	18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	DOK7	Q18PE1	504 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	TRMT10B	Q6PF06	316 aa	Known RBP	18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	TTC33	Q6PID6	262 aa	Predicted RBP	18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	OR5B17	Q8NGF7	314 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	UHRF1	Q96T88	793 aa	Predicted RBP	18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	OSBPL10	Q9BXB5	764 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	WDR41	Q9HAD4	459 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CDY2A	Q9Y6F7	541 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CDY1	Q9Y6F8	540 aa		18.19	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CROCC	Q5TZA2	2017 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ALOX5	P09917	674 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	YBX3	P16989	372 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	TCEA1	P23193	301 aa	Known RBP	18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	MIP	P30301	263 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	GNA12	Q03113	381 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	DMPK	Q09013	629 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	GALNT18	Q6P9A2	607 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	NPNT	Q6UXI9	565 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	C10orf107	Q8IVU9	208 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ZNF786	Q8N393	782 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	DEPDC1B	Q8WUY9	529 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CLEC4D	Q8WXI8	215 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	LRTOMT	Q8WZ04	291 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	USP13	Q92995	863 aa	Predicted RBP	18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	MAP3K20	Q9NYL2	800 aa	Known RBP	18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SCN4A	P35499	1836 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	BCLAF3	A2AJT9	711 aa	Known RBP	18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157		H7C0C1	242 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	MGEA5	O60502	916 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ALDH1A2	O94788	518 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ZNF182	P17025	639 aa	Predicted RBP	18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	TPSB2	P20231	275 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	MYF6	P23409	242 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ATP5O	P48047	213 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	TRAF2	Q12933	501 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	NAB1	Q13506	487 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	TPSAB1	Q15661	275 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	SLC9B1	Q4ZJI4	515 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PPP6R3	Q5H9R7	873 aa	Predicted RBP	18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PPM1L	Q5SGD2	360 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	STEAP4	Q687X5	459 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PPP4R4	Q6NUP7	873 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	FAM117B	Q6P1L5	589 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ITIH5	Q86UX2	942 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	RNF148	Q8N7C7	305 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ATP6V0D2	Q8N8Y2	350 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	RCN3	Q96D15	328 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CALN1	Q9BXU9	219 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	NIF3L1	Q9GZT8	377 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	HAPLN2	Q9GZV7	340 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	KLHL25	Q9H0H3	589 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CISH	Q9NSE2	258 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	USP18	Q9UMW8	372 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PCDHB12	Q9Y5F1	795 aa		18.18	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PSME4	Q14997	1843 aa		18.17	■□□□□ 0.5
POLR2J3-209	ENST00000504157	TNFRSF10A	O00220	468 aa		18.17	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CFLAR	O15519	480 aa		18.17	■□□□□ 0.5
POLR2J3-209	ENST00000504157	CLPX	O76031	633 aa		18.17	■□□□□ 0.5
POLR2J3-209	ENST00000504157	ALDOA	P04075	364 aa	Known RBP	18.17	■□□□□ 0.5
POLR2J3-209	ENST00000504157	PRKCG	P05129	697 aa		18.17	■□□□□ 0.5

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