RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 HP1BP3Q5SSJ5 553 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 DAB2IPQ5VWQ8 1189 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 ANKRD22Q5VYY1 191 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 PM20D1Q6GTS8 502 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 EFL1Q7Z2Z2 1120 aaKnown RBP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 DRAXINQ8NBI3 349 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 SMG8Q8ND04 991 aaKnown RBP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 SPPL2BQ8TCT7 592 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 SEPT8Q92599 483 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 PEX13Q92968 403 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 PPP1R14BQ96C90 147 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 FAM84AQ96KN4 292 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 BTBD10Q9BSF8 475 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 SENP6Q9GZR1 1112 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 CSNK1G1Q9HCP0 422 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 GALNT8Q9NY28 637 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 SAE1Q9UBE0 346 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 ABT1Q9ULW3 272 aaKnown RBP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 PTPRFP10586 1907 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 ARL5CA6NH57 179 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 PEX10O60683 326 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 ATP6V1G2O95670 118 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 BPGMP07738 259 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 RBP1P09455 135 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 PCSK2P16519 638 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 MLH1P40692 756 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 GALNT2Q10471 571 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 RAB41Q5JT25 222 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 PRUNE1Q86TP1 453 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 ZNF354CQ86Y25 554 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 SIGLEC10Q96LC7 697 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 C8orf48Q96LL4 319 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 B3GNT5Q9BYG0 378 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 SLC13A1Q9BZW2 595 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 ILKAPQ9H0C8 392 aaPredicted RBP7.56□□□□□ -1.2
PDGFC-203ENST00000502773 TKTL2Q9H0I9 626 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 MOCS1Q9NZB8 636 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 TAGLN3Q9UI15 199 aa7.56□□□□□ -1.2
PDGFC-203ENST00000502773 M0QZQ0 153 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 ANP32DO95626 131 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 MYL2P10916 166 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 HSPA8P11142 646 aaKnown RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 CPA3P15088 417 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 ADRA1DP25100 572 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 TM4SF4P48230 202 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 SLC12A1Q13621 1099 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 CHI3L2Q15782 390 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 TMEM154Q6P9G4 183 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 SLC22A9Q8IVM8 553 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 CYP4X1Q8N118 509 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 TAB3Q8N5C8 712 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PIP4K2CQ8TBX8 421 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 JADE3Q92613 823 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 MYLPFQ96A32 169 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 ZNF669Q96BR6 464 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 FCRL5Q96RD9 977 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 CCDC68Q9H2F9 335 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 SP110Q9HB58 689 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 MLXIPLQ9NP71 852 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PPARGC1AQ9UBK2 798 aaKnown RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PCDHB7Q9Y5E2 793 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 WDR91A4D1P6 747 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 AHCYL1O43865 530 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 SERPINA6P08185 405 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 DHRS4L1P0CG22 281 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 NFKBIAP25963 317 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PPP3CCP48454 512 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 OXCT1P55809 520 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 ADCY1Q08828 1119 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 MSLNQ13421 630 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 DPYSQ14117 519 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 NOMO2Q5JPE7 1267 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PACS1Q6VY07 963 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 OTOAQ7RTW8 1153 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 NUP93Q8N1F7 819 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 SCYL1Q96KG9 808 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 TEKT5Q96M29 485 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 ADAM2Q99965 735 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 C20orf96Q9NUD7 363 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PCMTD2Q9NV79 361 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 CLIC5Q9NZA1 410 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 HEY2Q9UBP5 337 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PADI3Q9ULW8 664 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 SOX13Q9UN79 622 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 TTLL3Q9Y4R7 772 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 HES2Q9Y543 173 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 WDR81Q562E7 1941 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 TRIM13O60858 407 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 FKBP6O75344 327 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 RHOQP17081 205 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 MAGEA3P43357 314 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 NCALDP61601 193 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 AP2B1P63010 937 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 BEX3Q00994 111 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 GBE1Q04446 702 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PRKAA1Q13131 559 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 FAM83EQ2M2I3 478 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 TRMT5Q32P41 509 aaKnown RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 MROH9Q5TGP6 573 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms