RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 FAM161BQ96MY7 647 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 AGAP2Q99490 1192 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 TRIM62Q9BVG3 475 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 SENP6Q9GZR1 1112 aaPredicted RBP16.92■□□□□ 0.3
VCAN-204ENST00000502527 DNAJC28Q9NX36 388 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 SNX10Q9Y5X0 201 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 F8W8V4 182 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 ATP9BO43861 1147 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 DUSP11O75319 330 aaKnown RBP16.91■□□□□ 0.3
VCAN-204ENST00000502527 KRT36O76013 467 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 TM7SF2O76062 418 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 JCHAINP01591 159 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 MYL4P12829 197 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 DNAJB2P25686 324 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 CSE1LP55060 971 aaKnown RBP16.91■□□□□ 0.3
VCAN-204ENST00000502527 UBAP2LQ14157 1087 aaKnown RBP16.91■□□□□ 0.3
VCAN-204ENST00000502527 RABGAP1LQ5R372 815 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 NAPEPLDQ6IQ20 393 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 TAC4Q86UU9 113 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 KCNMB4Q86W47 210 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 SCUBE1Q8IWY4 988 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 SCML4Q8N228 414 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 SREK1Q8WXA9 508 aaKnown RBP16.91■□□□□ 0.3
VCAN-204ENST00000502527 SOCS4Q8WXH5 440 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 MFSD3Q96ES6 412 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 PGLYRP2Q96PD5 576 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 SORT1Q99523 831 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 ACBD6Q9BR61 282 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 RHOBTB2Q9BYZ6 727 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 OSBPL2Q9H1P3 480 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 C20orf96Q9NUD7 363 aaPredicted RBP16.91■□□□□ 0.3
VCAN-204ENST00000502527 SOX13Q9UN79 622 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 PLA2G4CQ9UP65 541 aa16.91■□□□□ 0.3
VCAN-204ENST00000502527 A0A096LPK6 155 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 GPR182O15218 404 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 CIB2O75838 187 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 IGHA2P01877 340 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 CTSHP09668 335 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 ALOX15P16050 662 aaPredicted RBP16.9■□□□□ 0.3
VCAN-204ENST00000502527 ATP6V1C1P21283 382 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 CYP2C18P33260 490 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 VHLP40337 213 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 MXRA7P84157 204 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 SLC34A1Q06495 639 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 CDH17Q12864 832 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 GNASQ5JWF2 1037 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 C6orf163Q5TEZ5 329 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 FAM171BQ6P995 826 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 NET1Q7Z628 596 aaPredicted RBP16.9■□□□□ 0.3
VCAN-204ENST00000502527 MRPL10Q7Z7H8 261 aaKnown RBP16.9■□□□□ 0.3
VCAN-204ENST00000502527 LINC00523Q86TU6 105 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 FBXO27Q8NI29 283 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 ATXN7L3BQ96GX2 97 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 RTP3Q9BQQ7 232 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 DMAP1Q9NPF5 467 aaPredicted RBP16.9■□□□□ 0.3
VCAN-204ENST00000502527 STX18Q9P2W9 335 aaKnown RBP16.9■□□□□ 0.3
VCAN-204ENST00000502527 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.9■□□□□ 0.3
VCAN-204ENST00000502527 MYADML2A6NDP7 307 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 CHRNA1P02708 482 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 BDNFP23560 247 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 HADHAP40939 763 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 MPP3Q13368 585 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 THOC5Q13769 683 aaKnown RBP16.9■□□□□ 0.3
VCAN-204ENST00000502527 ITGA9Q13797 1035 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 MUM1Q2TAK8 710 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 CLEC14AQ86T13 490 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 OR6Y1Q8NGX8 325 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 DNAJC9Q8WXX5 260 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 AZIN2Q96A70 460 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 TSGA13Q96PP4 275 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 APOL2Q9BQE5 337 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 PAAF1Q9BRP4 392 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 CHRAC1Q9NRG0 131 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 PNPOQ9NVS9 261 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 ZNF358Q9NW07 568 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 NSMCE4AQ9NXX6 385 aa16.9■□□□□ 0.3
VCAN-204ENST00000502527 LIN7AO14910 233 aaPredicted RBP16.89■□□□□ 0.29
VCAN-204ENST00000502527 IDH3AP50213 366 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 SESN3P58005 492 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 TRMT5Q32P41 509 aaKnown RBP16.89■□□□□ 0.29
VCAN-204ENST00000502527 GDF6Q6KF10 455 aaPredicted RBP16.89■□□□□ 0.29
VCAN-204ENST00000502527 BEND5Q7L4P6 421 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 ULK2Q8IYT8 1036 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 PLCD3Q8N3E9 789 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 URGCPQ8TCY9 931 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 DQX1Q8TE96 717 aaKnown RBP16.89■□□□□ 0.29
VCAN-204ENST00000502527 DPF3Q92784 378 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 CELF6Q96J87 481 aaKnown RBP16.89■□□□□ 0.29
VCAN-204ENST00000502527 DSEQ9UL01 958 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 CDY1Q9Y6F8 540 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 E2F8A0AVK6 867 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 NVLO15381 856 aaKnown RBP16.89■□□□□ 0.29
VCAN-204ENST00000502527 SIN3BO75182 1162 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 H2AFYO75367 372 aaKnown RBP16.89■□□□□ 0.29
VCAN-204ENST00000502527 CYP11A1P05108 521 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 RPLP2P05387 115 aaKnown RBP16.89■□□□□ 0.29
VCAN-204ENST00000502527 SRGAP2BP0DMP2 458 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 ACADSP16219 412 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 TPH1P17752 444 aa16.89■□□□□ 0.29
VCAN-204ENST00000502527 ZRSR2Q15696 482 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms