RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 RPL34P49207 117 aaKnown RBP15.15■□□□□ 0.02
TRAF4-212ENST00000498540 FMO5P49326 533 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 PITX1P78337 314 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-212ENST00000498540 FKBP3Q00688 224 aaKnown RBP15.15■□□□□ 0.02
TRAF4-212ENST00000498540 CNTN1Q12860 1018 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 OVGP1Q12889 678 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 ZNF211Q13398 564 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-212ENST00000498540 PNOCQ13519 176 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 STILQ15468 1287 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 CCAR2Q8N163 923 aaKnown RBP15.15■□□□□ 0.02
TRAF4-212ENST00000498540 PPM1KQ8N3J5 372 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 NAF1Q96HR8 494 aaKnown RBP15.15■□□□□ 0.02
TRAF4-212ENST00000498540 NT5C1BQ96P26 610 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 LGMNQ99538 433 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 TSG101Q99816 390 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 KDM4CQ9H3R0 1056 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 ST7Q9NRC1 585 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 UCKL1Q9NWZ5 548 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 TJP2Q9UDY2 1190 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 DMTF1Q9Y222 760 aa15.15■□□□□ 0.02
TRAF4-212ENST00000498540 A0A1W2PQ27 194 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 A0A1W2PQ64 194 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 MAGEC1O60732 1142 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 IGLV3-25P01717 112 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 NUDT1P36639 197 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 NNMTP40261 264 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 GPD2P43304 727 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 DAB2P98082 770 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 CFHR1Q03591 330 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 KCNH2Q12809 1159 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 STAT4Q14765 748 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 SETMARQ53H47 684 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-212ENST00000498540 CXorf57Q6NSI4 855 aaKnown RBP15.14■□□□□ 0.01
TRAF4-212ENST00000498540 OR8D1Q8WZ84 308 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 BTN2A3PQ96KV6 586 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 PRMT1Q99873 361 aaKnown RBP15.14■□□□□ 0.01
TRAF4-212ENST00000498540 MYOCQ99972 504 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 ZDHHC9Q9Y397 364 aa15.14■□□□□ 0.01
TRAF4-212ENST00000498540 F5H5T6 163 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 PRAMEF26H0Y7S4 382 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 FFAR2O15552 330 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 SART1O43290 800 aaKnown RBP15.13■□□□□ 0.01
TRAF4-212ENST00000498540 TRUB2O95900 331 aaKnown RBP15.13■□□□□ 0.01
TRAF4-212ENST00000498540 MPOP05164 745 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 DGKAP23743 735 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 PLK1P53350 603 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 TAS2R38P59533 333 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 NUCB2P80303 420 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 E2F1Q01094 437 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 CENPCQ03188 943 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 SULT2A1Q06520 285 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 SLC12A1Q13621 1099 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 Q6ZVU0 165 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 BEND5Q7L4P6 421 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 RRAGAQ7L523 313 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 DSG4Q86SJ6 1040 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 ARHGEF19Q8IW93 802 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 TMEM145Q8NBT3 493 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 ZNF248Q8NDW4 579 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 OR52K2Q8NGK3 314 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 OR4C6Q8NH72 309 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 LMO3Q8TAP4 145 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 KLHDC7BQ96G42 594 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 PPM1HQ9ULR3 514 aa15.13■□□□□ 0.01
TRAF4-212ENST00000498540 A0A1B0GVM2 712 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 TCAF2A6NFQ2 919 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 KCNU1A8MYU2 1149 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 ERVH48-1M5A8F1 160 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 ATP9BO43861 1147 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 THEGLP0DJG4 465 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 GIMD1P0DJR0 217 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 MYF5P13349 255 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 PRLRP16471 622 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 IRAK1P51617 712 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 PCBP4P57723 403 aaKnown RBP15.12■□□□□ 0.01
TRAF4-212ENST00000498540 EIF4EBP2Q13542 120 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-212ENST00000498540 ACCSLQ4AC99 568 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 COBLL1Q53SF7 1204 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 ZNF658Q5TYW1 1059 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-212ENST00000498540 FAM46CQ5VWP2 391 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 CDCP2Q5VXM1 449 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 DENND1BQ6P3S1 775 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 TMC6Q7Z403 805 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 KLK6Q92876 244 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 ALG14Q96F25 216 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 HIC2Q96JB3 615 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 POPDC2Q9HBU9 364 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 CPNE5Q9HCH3 593 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 FZD3Q9NPG1 666 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 COL27A1Q8IZC6 1860 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-212ENST00000498540 COL6A6A6NMZ7 2263 aa15.12■□□□□ 0.01
TRAF4-212ENST00000498540 E5RJQ4 531 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 C1QTNF3-AMACRE9PGA6 284 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 SLC31A1O15431 190 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 BNIP3LO60238 219 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 OPA1O60313 960 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 RNGTTO60942 597 aaKnown RBP15.11■□□□□ 0.01
TRAF4-212ENST00000498540 CENPBP07199 599 aaPredicted RBP15.11■□□□□ 0.01
TRAF4-212ENST00000498540 ACADSBP45954 432 aa15.11■□□□□ 0.01
TRAF4-212ENST00000498540 VASPP50552 380 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms