RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 ARTNQ5T4W7 220 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 DCAF12L1Q5VU92 463 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 E4F1Q66K89 784 aaPredicted RBP18.9■□□□□ 0.62
HOXD11-202ENST00000498438 DNAJC24Q6P3W2 148 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 MMAAQ8IVH4 418 aaKnown RBP18.9■□□□□ 0.62
HOXD11-202ENST00000498438 STK40Q8N2I9 435 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 PTPRN2Q92932 1015 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 SUSD2Q9UGT4 822 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 SLC25A13Q9UJS0 675 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 SLC6A14Q9UN76 642 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 TCRBV5S1A1TA0A578 114 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 METTL12A8MUP2 240 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 MID1O15344 667 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 SEMA4FO95754 770 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 VAV1P15498 845 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 GPD1P21695 349 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 KCNA4P22459 653 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 HDAC4P56524 1084 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 GFPT1Q06210 699 aaPredicted RBP18.89■□□□□ 0.61
HOXD11-202ENST00000498438 NR1I3Q14994 352 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 CST6Q15828 149 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 ZSCAN23Q3MJ62 389 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 ARL13BQ3SXY8 428 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 ACAD10Q6JQN1 1059 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 WDR59Q6PJI9 974 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 STRADAQ7RTN6 431 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 SETD3Q86TU7 594 aaPredicted RBP18.89■□□□□ 0.61
HOXD11-202ENST00000498438 FRS2Q8WU20 508 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 FAM172AQ8WUF8 416 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 DNASE2BQ8WZ79 361 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 CENPIQ92674 756 aaPredicted RBP18.89■□□□□ 0.61
HOXD11-202ENST00000498438 FAM129BQ96TA1 746 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 PSMB7Q99436 277 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 TTYH3Q9C0H2 523 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 BTBD1Q9H0C5 482 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 PCED1AQ9H1Q7 454 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 C6orf106Q9H6K1 298 aaPredicted RBP18.89■□□□□ 0.61
HOXD11-202ENST00000498438 TAS2R14Q9NYV8 317 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 SERGEFQ9UGK8 458 aa18.89■□□□□ 0.61
HOXD11-202ENST00000498438 SIGLEC16A6NMB1 481 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 GNSP15586 552 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 TNFAIP3P21580 790 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 ADRA1BP35368 520 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 PSMD8P48556 350 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 VASPP50552 380 aaPredicted RBP18.88■□□□□ 0.61
HOXD11-202ENST00000498438 FANCCQ00597 558 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 C6orf118Q5T5N4 469 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 SFMBT2Q5VUG0 894 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 DAB2IPQ5VWQ8 1189 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 USP30Q70CQ3 517 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 MCOLN2Q8IZK6 566 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 ZCCHC9Q8N567 271 aaKnown RBP18.88■□□□□ 0.61
HOXD11-202ENST00000498438 CCDC185Q8N715 623 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 GANCQ8TET4 914 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 SNX19Q92543 992 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 MCEEQ96PE7 176 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 ZYG11BQ9C0D3 744 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 MIR1-1HGQ9H1L0 117 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 SGK2Q9HBY8 427 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 FBXL12Q9NXK8 326 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 ZNF212Q9UDV6 495 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 SCML1Q9UN30 329 aa18.88■□□□□ 0.61
HOXD11-202ENST00000498438 A0A0D9SEW6 157 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 A0A1W2PP55 124 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 TMCO5BA8MYB1 307 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 ATP9BO43861 1147 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 SNAP91O60641 907 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 RRM1P23921 792 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 OR1E1P30953 314 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 ELAVL3Q14576 367 aaKnown RBP18.87■□□□□ 0.61
HOXD11-202ENST00000498438 UAP1L1Q3KQV9 507 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 ACCSLQ4AC99 568 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 LRSAM1Q6UWE0 723 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 SH2D3CQ8N5H7 860 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 C2orf49Q9BVC5 232 aaPredicted RBP18.87■□□□□ 0.61
HOXD11-202ENST00000498438 GTPBP2Q9BX10 602 aaKnown RBP18.87■□□□□ 0.61
HOXD11-202ENST00000498438 HAUS4Q9H6D7 363 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 AIPL1Q9NZN9 384 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 PPARGC1AQ9UBK2 798 aaKnown RBP18.87■□□□□ 0.61
HOXD11-202ENST00000498438 OR12D3Q9UGF7 316 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 EIF2B4Q9UI10 523 aaKnown RBP18.87■□□□□ 0.61
HOXD11-202ENST00000498438 VPS51Q9UID3 782 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 NCKAP1Q9Y2A7 1128 aa18.87■□□□□ 0.61
HOXD11-202ENST00000498438 A0A1B0GTW7 788 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 ANKRD62A6NC57 917 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 GOLGA6L19H0YKK7 550 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 ARHGAP33O14559 1287 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 CCP110O43303 1012 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 RNASEH2AO75792 299 aaKnown RBP18.86■□□□□ 0.61
HOXD11-202ENST00000498438 ADH1BP00325 375 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 SLC8A1P32418 973 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 ZNF143P52747 638 aaPredicted RBP18.86■□□□□ 0.61
HOXD11-202ENST00000498438 ATXN3P54252 364 aaPredicted RBP18.86■□□□□ 0.61
HOXD11-202ENST00000498438 RPL7AP62424 266 aaKnown RBP18.86■□□□□ 0.61
HOXD11-202ENST00000498438 KRT83P78385 493 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 NRG1Q02297 640 aaPredicted RBP18.86■□□□□ 0.61
HOXD11-202ENST00000498438 DLG2Q15700 870 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 PPP1R15BQ5SWA1 713 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 MANEALQ5VSG8 457 aa18.86■□□□□ 0.61
HOXD11-202ENST00000498438 Q6ZVU0 165 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms