RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ZFHX3Q15911 3703 aa3.95□□□□□ -1.78
EXOSC3-208ENST00000496910 ZZEF1O43149 2961 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ARHGEF10O15013 1369 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CACNA1HO95180 2353 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ENO4A6NNW6 628 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 BTBD11A6QL63 1104 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DIRC3C9JPN6 131 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 PCDH17O14917 1159 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 VILLO15195 856 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 IPO8O15397 1037 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ADAM20O43506 726 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 KCNQ3O43525 872 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DNPH1O43598 174 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 TBC1D4O60343 1298 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SRGAP2O75044 1071 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CELF2O95319 508 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ABHD16AO95870 558 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 F9P00740 461 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CFIP05156 583 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CLEC3BP05452 202 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 TPM2P07951 284 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CKBP12277 381 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DESP17661 470 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 EGR1P18146 543 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 FDXRP22570 491 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 POLE2P56282 527 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 MRPS35P82673 323 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 RBP5P82980 135 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DGCR2P98153 550 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SRSF1Q07955 248 aaKnown RBP eCLIP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 C17orf67Q0P5P2 114 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SCAPQ12770 1279 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CTBP1Q13363 440 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 PPA1Q15181 289 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 BEAN1Q3B7T3 259 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SETMARQ53H47 684 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 MIIPQ5JXC2 388 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 RAP1GAP2Q684P5 730 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 GPR139Q6DWJ6 353 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DCLRE1AQ6PJP8 1040 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 RAPH1Q70E73 1250 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 NUP54Q7Z3B4 507 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CCDC91Q7Z6B0 441 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 PRRT2Q7Z6L0 340 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SLFN11Q7Z7L1 901 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 GALNT7Q86SF2 657 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 NLRP14Q86W24 1093 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ANKRD13BQ86YJ7 626 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DIS3L2Q8IYB7 885 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SAMD14Q8IZD0 417 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ADSSL1Q8N142 457 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 TMEM57Q8N5G2 664 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 PDPRQ8NCN5 879 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 LSM14AQ8ND56 463 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 OR56A3Q8NH54 315 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 TBC1D15Q8TC07 691 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CPT1CQ8TCG5 803 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SH3RF3Q8TEJ3 882 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF483Q8TF39 744 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 RUFY2Q8WXA3 655 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 N4BP2L2Q92802 583 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SCAMP4Q969E2 229 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ZKSCAN4Q969J2 545 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 FUBP1Q96AE4 644 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 MARS2Q96GW9 593 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 FEM1CQ96JP0 617 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 TRAPPC9Q96Q05 1148 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 PIGSQ96S52 555 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DCLRE1CQ96SD1 692 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CDK5RAP1Q96SZ6 601 aaKnown RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ZSWIM1Q9BR11 485 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SLC46A2Q9BY10 475 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 NDST4Q9H3R1 872 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CYP4F11Q9HBI6 524 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ERVK-5Q9HDB9 667 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 POGKQ9P215 609 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 C5AR2Q9P296 337 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CTTNBP2NLQ9P2B4 639 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 TBC1D14Q9P2M4 693 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ANKFY1Q9P2R3 1169 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ZNF212Q9UDV6 495 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SRRDQ9UH36 339 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CHORDC1Q9UHD1 332 aaPredicted RBP3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SORCS3Q9UPU3 1222 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CAMK2AQ9UQM7 478 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DNAJC16Q9Y2G8 782 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 ATP6V0A2Q9Y487 856 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 DNHD1Q96M86 4753 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 SPTA1P02549 2419 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CREBBPQ92793 2442 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CASKIN1Q8WXD9 1431 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 CLSPNQ9HAW4 1339 aa3.94□□□□□ -1.78
EXOSC3-208ENST00000496910 TENM4Q6N022 2769 aa3.93□□□□□ -1.78
EXOSC3-208ENST00000496910 MTUS2Q5JR59 1369 aa3.93□□□□□ -1.78
EXOSC3-208ENST00000496910 A0A1B0GTW7 788 aa3.93□□□□□ -1.78
EXOSC3-208ENST00000496910 B8ZZF3 427 aa3.93□□□□□ -1.78
EXOSC3-208ENST00000496910 PTGES3LE9PB15 166 aa3.93□□□□□ -1.78
EXOSC3-208ENST00000496910 PYCARD-AS1I3L0S3 204 aa3.93□□□□□ -1.78
EXOSC3-208ENST00000496910 PRRG2O14669 202 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms