RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 A0A0D9SEW6 157 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 ARHGAP42A6NI28 874 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 TIMM44O43615 452 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 DRD1P21728 446 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 NR2C2P49116 596 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 ADCY2Q08462 1091 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 GRSF1Q12849 480 aaKnown RBP eCLIP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 EIF4HQ15056 248 aaKnown RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 GEN1Q17RS7 908 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 TMEM196Q5HYL7 178 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 PITRM1Q5JRX3 1037 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 LRRC49Q8IUZ0 686 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 ARHGAP12Q8IWW6 846 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 ARHGEF2Q92974 986 aaKnown RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 C2orf49Q9BVC5 232 aaPredicted RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 SLC39A8Q9C0K1 460 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 ATP13A1Q9HD20 1204 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 HPCAL4Q9UM19 191 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 MRPS17Q9Y2R5 130 aaKnown RBP22.29■■□□□ 1.16
C9orf3-222ENST00000496567 HEY1Q9Y5J3 304 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 OR51B4Q9Y5P0 310 aa22.29■■□□□ 1.16
C9orf3-222ENST00000496567 MIA3Q5JRA6 1907 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 APOC4-APOC2K7ER74 178 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 MFSD11O43934 449 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 APOC2P02655 101 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 POLR2EP19388 210 aaKnown RBP22.28■■□□□ 1.16
C9orf3-222ENST00000496567 MX2P20592 715 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 STARD6P59095 220 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 SULT2A1Q06520 285 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 IL31Q6EBC2 164 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 ZNF354CQ86Y25 554 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 SLC13A5Q86YT5 568 aaPredicted RBP22.28■■□□□ 1.16
C9orf3-222ENST00000496567 SIX5Q8N196 739 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 DCAF4L2Q8NA75 395 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 OR7D4Q8NG98 312 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 MAIP1Q8WWC4 291 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 P3H4Q92791 437 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 ALG14Q96F25 216 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 SPON2Q9BUD6 331 aa22.28■■□□□ 1.16
C9orf3-222ENST00000496567 INTS6Q9UL03 887 aaKnown RBP22.28■■□□□ 1.16
C9orf3-222ENST00000496567 KRBA1A5PL33 1030 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 DFFAO00273 331 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 FANCGO15287 622 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 NCAM2O15394 837 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 DCXO43602 365 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 TNFRSF4P43489 277 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 GBE1Q04446 702 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 MESP2Q0VG99 397 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 FUT11Q495W5 492 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 MBLAC2Q68D91 279 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 ADIPOR2Q86V24 386 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 APCDD1Q8J025 514 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 RASGEF1CQ8N431 466 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 TTC13Q8NBP0 860 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 ACDQ96AP0 544 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 HMCESQ96FZ2 354 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 NAP1L3Q99457 506 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-222ENST00000496567 HERPUD2Q9BSE4 406 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 ACE2Q9BYF1 805 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-222ENST00000496567 FBRSL1Q9HCM7 1045 aaKnown RBP22.27■■□□□ 1.16
C9orf3-222ENST00000496567 DTLQ9NZJ0 730 aa22.27■■□□□ 1.16
C9orf3-222ENST00000496567 TTC7AQ9ULT0 858 aaPredicted RBP22.27■■□□□ 1.16
C9orf3-222ENST00000496567 FGGP02679 453 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 ATP5BP06576 529 aaKnown RBP22.26■■□□□ 1.15
C9orf3-222ENST00000496567 ACVRL1P37023 503 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 PAPOLAP51003 745 aaKnown RBP22.26■■□□□ 1.15
C9orf3-222ENST00000496567 SIGLEC14Q08ET2 396 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 KLF1Q13351 362 aaPredicted RBP22.26■■□□□ 1.15
C9orf3-222ENST00000496567 SERINC3Q13530 473 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 E2F5Q15329 346 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 UCMAQ8WVF2 138 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 EDAQ92838 391 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 TTC17Q96AE7 1141 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 CIPCQ9C0C6 399 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 ELOVL2Q9NXB9 296 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 CHD5Q8TDI0 1954 aa22.26■■□□□ 1.15
C9orf3-222ENST00000496567 SHISA7A6NL88 538 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 KDELR3O43731 214 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 ASLP04424 464 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 ALADP13716 330 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 GALNT2Q10471 571 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 SLC10A2Q12908 348 aaPredicted RBP22.25■■□□□ 1.15
C9orf3-222ENST00000496567 PDK1Q15118 436 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 TMEM215Q68D42 235 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 FSTL4Q6MZW2 842 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 NPNTQ6UXI9 565 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 ATPAF2Q8N5M1 289 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 CCDC26Q8TAB7 109 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 COG1Q8WTW3 980 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 NELL2Q99435 816 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 NUP205Q92621 2012 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 CXorf51AA0A1B0GTR3 108 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 KANSL1LA0AUZ9 987 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 PRRT4C9JH25 899 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 CBX4O00257 560 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 CD72P21854 359 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 LONRF2Q1L5Z9 754 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 FBXO43Q4G163 708 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 TP53INP2Q8IXH6 220 aa22.25■■□□□ 1.15
C9orf3-222ENST00000496567 NETO2Q8NC67 525 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms