RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PQBP1O60828 265 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 EFCAB14O75071 495 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 SPAG7O75391 227 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 BANF1O75531 89 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 DCTN3O75935 186 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 DDHD2O94830 711 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 LRIG2O94898 1065 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 AP2A1O95782 977 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 IGLV3-25P01717 112 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 PRKCHP24723 683 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 CCNCP24863 283 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 PTPN3P26045 913 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 MAGEA3P43357 314 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 NPY2RP49146 381 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 TUFMP49411 452 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 ALDH7A1P49419 539 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 AFF1P51825 1210 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 ARPP19P56211 112 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 TBX4P57082 545 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 CORO7P57737 925 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 PITX1P78337 314 aaPredicted RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 MGAT5Q09328 741 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 CDH17Q12864 832 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 SLC10A2Q12908 348 aaPredicted RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 IFT88Q13099 833 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 VEPH1Q14D04 833 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 TAF12Q16514 161 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 PDK4Q16654 411 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 MGAT5BQ3V5L5 792 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 KBTBD12Q3ZCT8 623 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 TEX44Q53QW1 395 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 SPOUT1Q5T280 376 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 UBAP2Q5T6F2 1119 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 ATG16L1Q676U5 607 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 KIAA1841Q6NSI8 718 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 LVRNQ6Q4G3 990 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 RGS9BPQ6ZS82 235 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 CYS1Q717R9 158 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 MARK2Q7KZI7 788 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 SPATA21Q7Z572 469 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 ZNF354CQ86Y25 554 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 LRRC34Q8IZ02 419 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 ZNF567Q8N184 647 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 C4orf33Q8N1A6 199 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
USP39-219ENST00000496047 STKLD1Q8NE28 680 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 DBF4BQ8NFT6 615 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 ACMSDQ8TDX5 336 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 DCAKDQ8WVC6 231 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 LINC01599Q8WXQ3 324 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 TTC17Q96AE7 1141 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 FAM122AQ96E09 287 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 SPATA17Q96L03 361 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 ZNF317Q96PQ6 595 aaPredicted RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 LGMNQ99538 433 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 SEPT5Q99719 369 aaPredicted RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 ELAC2Q9BQ52 826 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 TTPALQ9BTX7 342 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 DHRS4Q9BTZ2 278 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 FSD1LQ9BXM9 530 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 PITPNM3Q9BZ71 974 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 IL22Q9GZX6 179 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 NACA2Q9H009 215 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 RASSF4Q9H2L5 321 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 HIPK3Q9H422 1215 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 RETREG1Q9H6L5 497 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 SP110Q9HB58 689 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 TMLHEQ9NVH6 421 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 MKS1Q9NXB0 559 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 CLIC5Q9NZA1 410 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 ZFATQ9P243 1243 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 STK39Q9UEW8 545 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 IPO11Q9UI26 975 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 PRDM4Q9UKN5 801 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 CDV3Q9UKY7 258 aaKnown RBP7.08□□□□□ -1.28
USP39-219ENST00000496047 VANGL2Q9ULK5 521 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 ARL2BPQ9Y2Y0 163 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 TTLL3Q9Y4R7 772 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 PCDHB9Q9Y5E1 797 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 A0A1W2PQH9 124 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 TYW5A2RUC4 315 aaKnown RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 MTMR11A4FU01 709 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 FAM159BA6NKW6 160 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 WASH4PA8MWX3 477 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 TRIM49D1C9J1S8 452 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 E9PAM4 449 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 ENPP3O14638 875 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 TNFRSF10BO14763 440 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 GLRA3O75311 464 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 PAGE1O75459 146 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 USP1O94782 785 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 METTL18O95568 372 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 MOCS2O96007 188 aaPredicted RBP7.07□□□□□ -1.28
USP39-219ENST00000496047 ITGB1P05556 798 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 FYNP06241 537 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 GSTA1P08263 222 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 FGFR3P22607 806 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 MGAT1P26572 445 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 GCAP28676 217 aa7.07□□□□□ -1.28
USP39-219ENST00000496047 HOXC13P31276 330 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms