RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SMTNL1A8MU46 457 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 I6L893 689 aaPredicted RBP24.89■■□□□ 1.58
HLA-C-209ENST00000495835 ALOX15BO15296 676 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 ZNF883P0CG24 379 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 GOT1P17174 413 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 CD27P26842 260 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 NSFP46459 744 aaKnown RBP24.89■■□□□ 1.58
HLA-C-209ENST00000495835 STK19P49842 368 aaPredicted RBP24.89■■□□□ 1.58
HLA-C-209ENST00000495835 TRNP1Q6NT89 227 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 ZNF783Q6ZMS7 281 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 AOPEPQ8N6M6 819 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 GANCQ8TET4 914 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 BIRC7Q96CA5 298 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 OMDQ99983 421 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 C2orf49Q9BVC5 232 aaPredicted RBP24.89■■□□□ 1.58
HLA-C-209ENST00000495835 METTL5Q9NRN9 209 aaKnown RBP24.89■■□□□ 1.58
HLA-C-209ENST00000495835 MYO6Q9UM54 1294 aa24.89■■□□□ 1.58
HLA-C-209ENST00000495835 LRRC72A6NJI9 287 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 MID1O15344 667 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 CER1O95813 267 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 CALB1P05937 261 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 RHOCP08134 193 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 PTPN9P43378 593 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 IRAK1P51617 712 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 ZNF252P-AS1Q0IIN9 211 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 TEAD4Q15561 434 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 ARL13BQ3SXY8 428 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 C6orf118Q5T5N4 469 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 STRADAQ7RTN6 431 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 PHF13Q86YI8 300 aaPredicted RBP24.88■■□□□ 1.57
HLA-C-209ENST00000495835 STK40Q8N2I9 435 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 DEFB124Q8NES8 71 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 OR52K2Q8NGK3 314 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 OR2T34Q8NGX1 318 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 MUC3BQ9H195 1237 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 NEUROG2Q9H2A3 272 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 PPARGC1AQ9UBK2 798 aaKnown RBP24.88■■□□□ 1.57
HLA-C-209ENST00000495835 HS3ST2Q9Y278 367 aa24.88■■□□□ 1.57
HLA-C-209ENST00000495835 E9PAM4 449 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 GIPC1O14908 333 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 RNASEH2AO75792 299 aaKnown RBP24.87■■□□□ 1.57
HLA-C-209ENST00000495835 CNTN5O94779 1100 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 CD59P13987 128 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 SDC4P31431 198 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 GGCXP38435 758 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 GRIA4P48058 902 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 GALCP54803 685 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 NRG1Q02297 640 aaPredicted RBP24.87■■□□□ 1.57
HLA-C-209ENST00000495835 PTP4A2Q12974 167 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 CLEC16AQ2KHT3 1053 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 ANO6Q4KMQ2 910 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 ALFQ53S48 1182 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 FAM46CQ5VWP2 391 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 KIAA0895LQ68EN5 471 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 SH2D3CQ8N5H7 860 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 SLC30A5Q8TAD4 765 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 OR8D1Q8WZ84 308 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 SNX19Q92543 992 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 FAM131CQ96AQ9 280 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 KDM4CQ9H3R0 1056 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 ADAM22Q9P0K1 906 aa24.87■■□□□ 1.57
HLA-C-209ENST00000495835 CXorf51AA0A1B0GTR3 108 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 C2CD4BA6NLJ0 364 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 C10orf142B7Z368 130 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 MCF2LO15068 1137 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 FERP16591 822 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 DLG2Q15700 870 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 ACCSLQ4AC99 568 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 PPP1R2P3Q6NXS1 205 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 FAM131BQ86XD5 332 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 RXFP2Q8WXD0 754 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 CENPIQ92674 756 aaPredicted RBP24.86■■□□□ 1.57
HLA-C-209ENST00000495835 PCDHB18PQ96TA0 734 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 AGPAT1Q99943 283 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 C11orf70Q9BRQ4 267 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 ZYG11BQ9C0D3 744 aa24.86■■□□□ 1.57
HLA-C-209ENST00000495835 A0A1W2PP55 124 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 ILVBLA1L0T0 632 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 SLC7A4O43246 635 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 FSBPO95073 299 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 IL1BP01584 269 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 IGHV4-34P06331 123 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 KRT3P12035 628 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 ATP1A3P13637 1013 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 OR1E1P30953 314 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 CCR5P51681 352 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 CLCN6P51797 869 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 ATP11AP98196 1134 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 CCDC14Q49A88 953 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 EMC1Q8N766 993 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 DCAF4L2Q8NA75 395 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 C3orf20Q8ND61 904 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 CCDC114Q96M63 670 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 OSBPL2Q9H1P3 480 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 TM9SF3Q9HD45 589 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 RTN4Q9NQC3 1192 aaKnown RBP24.85■■□□□ 1.57
HLA-C-209ENST00000495835 SERGEFQ9UGK8 458 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 FARP1Q9Y4F1 1045 aaPredicted RBP24.85■■□□□ 1.57
HLA-C-209ENST00000495835 ACACBO00763 2458 aa24.85■■□□□ 1.57
HLA-C-209ENST00000495835 TPRP12270 2363 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms