RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 SCAMP1O15126 338 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 ALOX15BO15296 676 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 GABBR2O75899 941 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 LTFP02788 710 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 ALPPL2P10696 532 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 ARL13BQ3SXY8 428 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 DCAF6Q58WW2 860 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 AGBL4Q5VU57 503 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 LCLAT1Q6UWP7 414 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 MMS22LQ6ZRQ5 1243 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 DSG4Q86SJ6 1040 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 GRAMD1CQ8IYS0 662 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 PRR11Q96HE9 360 aaPredicted RBP13.87□□□□□ -0.19
COL1A1-209ENST00000495677 SERPINB11Q96P15 392 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 UCKL1Q9NWZ5 548 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 SERTAD1Q9UHV2 236 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 PPM1HQ9ULR3 514 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 PCDHA7Q9UN72 937 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 COQ4Q9Y3A0 265 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 U3KQA8 63 aa13.87□□□□□ -0.19
COL1A1-209ENST00000495677 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.86□□□□□ -0.19
COL1A1-209ENST00000495677 O00370 1275 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 MCF2LO15068 1137 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 ACTN4O43707 911 aaKnown RBP13.86□□□□□ -0.19
COL1A1-209ENST00000495677 STX10O60499 249 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 RTN2O75298 545 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 FYNP06241 537 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 THEGLP0DJG4 465 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 LCP1P13796 627 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 RBMS1P29558 406 aaKnown RBP13.86□□□□□ -0.19
COL1A1-209ENST00000495677 MAT2AP31153 395 aaKnown RBP13.86□□□□□ -0.19
COL1A1-209ENST00000495677 YWHAEP62258 255 aaKnown RBP13.86□□□□□ -0.19
COL1A1-209ENST00000495677 ADAM9Q13443 819 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 PMF1Q6P1K2 205 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 BEND5Q7L4P6 421 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 TMC6Q7Z403 805 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 DCP2Q8IU60 420 aaKnown RBP13.86□□□□□ -0.19
COL1A1-209ENST00000495677 CFAP52Q8N1V2 620 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 UBA3Q8TBC4 463 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 OR8D1Q8WZ84 308 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 HSFY1Q96LI6 401 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 PPP1R9BQ96SB3 815 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 ABCG4Q9H172 646 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 NUCKS1Q9H1E3 243 aaKnown RBP13.86□□□□□ -0.19
COL1A1-209ENST00000495677 MMRN2Q9H8L6 949 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 SARDHQ9UL12 918 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 COL12A1Q99715 3063 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 UNC13CQ8NB66 2214 aa13.86□□□□□ -0.19
COL1A1-209ENST00000495677 DOCK4Q8N1I0 1966 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 ATP9BO43861 1147 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 FBXO21O94952 628 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 RHOBTB3O94955 611 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 CENPBP07199 599 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-209ENST00000495677 STK19P49842 368 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-209ENST00000495677 MXI1P50539 228 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 METAP1P53582 386 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 OXCT1P55809 520 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 TAS2R38P59533 333 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 CNTN1Q12860 1018 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 CNGA2Q16280 664 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 CCDC81Q6ZN84 652 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 CLEC14AQ86T13 490 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 TPCN2Q8NHX9 752 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 ERCC4Q92889 916 aaPredicted RBP13.85□□□□□ -0.19
COL1A1-209ENST00000495677 EEF2KMTQ96G04 330 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 USP25Q9UHP3 1055 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 SATB2Q9UPW6 733 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 CEP83Q9Y592 693 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 ENTPD2Q9Y5L3 495 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
COL1A1-209ENST00000495677 A0A1W2PNU3 283 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-209ENST00000495677 EME2A4GXA9 379 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-209ENST00000495677 C1QTNF3-AMACRE9PGA6 284 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 PYCARD-AS1I3L0S3 204 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 K7ESM1 405 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 PAEPP09466 180 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 VAV1P15498 845 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 RPL34P49207 117 aaKnown RBP13.84□□□□□ -0.19
COL1A1-209ENST00000495677 HNRNPKP61978 463 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL1A1-209ENST00000495677 CCDC15Q0P6D6 951 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 CUL2Q13617 745 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 ZCWPW2Q504Y3 356 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 KIAA1614Q5VZ46 1190 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 ATL3Q6DD88 541 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 ABI3BPQ7Z7G0 1075 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 LURAP1LQ8IV03 231 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 GUF1Q8N442 669 aaKnown RBP13.84□□□□□ -0.19
COL1A1-209ENST00000495677 UBR7Q8N806 425 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 SRRTQ9BXP5 876 aaKnown RBP13.84□□□□□ -0.19
COL1A1-209ENST00000495677 GPR27Q9NS67 375 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 NCKIPSDQ9NZQ3 722 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 SALL4Q9UJQ4 1053 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 HS3ST3A1Q9Y663 406 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 UBR5O95071 2799 aaPredicted RBP13.84□□□□□ -0.19
COL1A1-209ENST00000495677 BOD1L1Q8NFC6 3051 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 BSNQ9UPA5 3926 aa13.84□□□□□ -0.19
COL1A1-209ENST00000495677 TERTO14746 1132 aaKnown RBP13.83□□□□□ -0.2
COL1A1-209ENST00000495677 FFAR2O15552 330 aa13.83□□□□□ -0.2
COL1A1-209ENST00000495677 TCEA3O75764 348 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms