RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 PTPRQQ9UMZ3 2332 aa18.1■□□□□ 0.49
TMEM53-209ENST00000495630 KALRNO60229 2985 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 ARID1BQ8NFD5 2236 aaPredicted RBP18.09■□□□□ 0.49
TMEM53-209ENST00000495630 RNGTTO60942 597 aaKnown RBP18.09■□□□□ 0.49
TMEM53-209ENST00000495630 RTN2O75298 545 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 MT-CO3P00414 261 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 VAV1P15498 845 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 MAT2AP31153 395 aaKnown RBP18.09■□□□□ 0.49
TMEM53-209ENST00000495630 TLE3Q04726 772 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 CETN1Q12798 172 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 ZC3H12AQ5D1E8 599 aaKnown RBP18.09■□□□□ 0.49
TMEM53-209ENST00000495630 CHSY1Q86X52 802 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 PPM1KQ8N3J5 372 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 ZNF843Q8N446 348 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 ATP6V0D2Q8N8Y2 350 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 OR8D1Q8WZ84 308 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 KLHDC7BQ96G42 594 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 GSDMAQ96QA5 445 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 GTPBP4Q9BZE4 634 aaKnown RBP18.09■□□□□ 0.49
TMEM53-209ENST00000495630 PPM1HQ9ULR3 514 aa18.09■□□□□ 0.49
TMEM53-209ENST00000495630 KCNU1A8MYU2 1149 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 F5H5T6 163 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 TRIM38O00635 465 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 SIGLEC6O43699 453 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 ATP9BO43861 1147 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 PDGFRAP16234 1089 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 METAP1P53582 386 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 PMS1P54277 932 aaKnown RBP18.08■□□□□ 0.48
TMEM53-209ENST00000495630 EIF4EBP2Q13542 120 aaPredicted RBP18.08■□□□□ 0.48
TMEM53-209ENST00000495630 SETMARQ53H47 684 aaPredicted RBP18.08■□□□□ 0.48
TMEM53-209ENST00000495630 HS1BP3Q53T59 392 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 TTC39BQ5VTQ0 682 aaPredicted RBP18.08■□□□□ 0.48
TMEM53-209ENST00000495630 ERICH1Q86X53 443 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 SPACA3Q8IXA5 215 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 CCAR2Q8N163 923 aaKnown RBP18.08■□□□□ 0.48
TMEM53-209ENST00000495630 SLC25A45Q8N413 288 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 LMO3Q8TAP4 145 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 ERCC4Q92889 916 aaPredicted RBP18.08■□□□□ 0.48
TMEM53-209ENST00000495630 KAT5Q92993 513 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 MED15Q96RN5 788 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 ST7Q9NRC1 585 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 KLHL11Q9NVR0 708 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 SARDHQ9UL12 918 aa18.08■□□□□ 0.48
TMEM53-209ENST00000495630 C1QTNF3-AMACRE9PGA6 284 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 MCF2LO15068 1137 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 ALOX15BO15296 676 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 P4HA2O15460 535 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 TRUB2O95900 331 aaKnown RBP18.07■□□□□ 0.48
TMEM53-209ENST00000495630 CALCAP01258 141 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 IGLV3-25P01717 112 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 SLC2A3P11169 496 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 PLA2G2AP14555 144 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 YWHAZP63104 245 aaKnown RBP18.07■□□□□ 0.48
TMEM53-209ENST00000495630 CCDC173Q0VFZ6 552 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 CNTN1Q12860 1018 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 PNOCQ13519 176 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 TMEM110Q86TL2 294 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 PRMT1Q99873 361 aaKnown RBP18.07■□□□□ 0.48
TMEM53-209ENST00000495630 SLC4A5Q9BY07 1137 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 THAP9Q9H5L6 903 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 POPDC2Q9HBU9 364 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 PREBQ9HCU5 417 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 ZDHHC9Q9Y397 364 aa18.07■□□□□ 0.48
TMEM53-209ENST00000495630 A0A1B0GVM2 712 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 TCAF2A6NFQ2 919 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 SDC3O75056 442 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 ZNF18P17022 549 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 DGKAP23743 735 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 GCNT1Q02742 428 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 CFHR1Q03591 330 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 KCNH2Q12809 1159 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 DLG2Q15700 870 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 ACCSLQ4AC99 568 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 RABGAP1LQ5R372 815 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 AGBL4Q5VU57 503 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 NEK5Q6P3R8 708 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 KDM7AQ6ZMT4 941 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 RRAGAQ7L523 313 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 LSMEM2Q8N112 164 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 ZNF248Q8NDW4 579 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 OR4C6Q8NH72 309 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 ALG14Q96F25 216 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 WBP1Q96G27 269 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 CEP63Q96MT8 703 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 ZNF578Q96N58 590 aaPredicted RBP18.06■□□□□ 0.48
TMEM53-209ENST00000495630 CNTN6Q9UQ52 1028 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
TMEM53-209ENST00000495630 ASH1LQ9NR48 2969 aaKnown RBP18.05■□□□□ 0.48
TMEM53-209ENST00000495630 ERVH48-1M5A8F1 160 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 SMC2O95347 1197 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 CXADRP78310 365 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 DAB2P98082 770 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 CCDC15Q0P6D6 951 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 KCNMA1Q12791 1236 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 MEA1Q16626 185 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 CDCP2Q5VXM1 449 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 CXorf57Q6NSI4 855 aaKnown RBP18.05■□□□□ 0.48
TMEM53-209ENST00000495630 TMEM145Q8NBT3 493 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 EHBP1Q8NDI1 1231 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 SPATA20Q8TB22 786 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms