RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 FBXO36Q8NEA4 188 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 UHMK1Q8TAS1 419 aaKnown RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 ZNF707Q96C28 371 aaPredicted RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 SPATA17Q96L03 361 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 PPP1R2P1Q96PQ5 205 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 C10orf88Q9H8K7 445 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 OLA1Q9NTK5 396 aaKnown RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 IGSF9Q9P2J2 1179 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 TRHDEQ9UKU6 1024 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.69■□□□□ 0.26
CBX4-204ENST00000495122 TEX264Q9Y6I9 313 aa16.69■□□□□ 0.26
CBX4-204ENST00000495122 GMNCA6NCL1 334 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 ERI2A8K979 691 aaKnown RBP16.68■□□□□ 0.26
CBX4-204ENST00000495122 CREB3O43889 395 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 ERCC2P18074 760 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 CCR1P32246 355 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 IFI35P80217 286 aaPredicted RBP16.68■□□□□ 0.26
CBX4-204ENST00000495122 PARP6Q2NL67 630 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 BBS9Q3SYG4 887 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 FNBP1LQ5T0N5 605 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 CYS1Q717R9 158 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 LRRC49Q8IUZ0 686 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 CCDC13Q8IYE1 715 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 MAML1Q92585 1016 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 HDAC11Q96DB2 347 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 SGSM3Q96HU1 749 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 XPO6Q96QU8 1125 aaKnown RBP16.68■□□□□ 0.26
CBX4-204ENST00000495122 TMEM209Q96SK2 561 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 PRRX2Q99811 253 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 SELENOSQ9BQE4 189 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 NAT9Q9BTE0 207 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 TTPALQ9BTX7 342 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 DHRS4Q9BTZ2 278 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 FAM107BQ9H098 131 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 TKTL2Q9H0I9 626 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 ETNK1Q9HBU6 452 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 INTS9Q9NV88 658 aaKnown RBP16.68■□□□□ 0.26
CBX4-204ENST00000495122 ZDHHC7Q9NXF8 308 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 CLIC5Q9NZA1 410 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 SMG5Q9UPR3 1016 aaKnown RBP16.68■□□□□ 0.26
CBX4-204ENST00000495122 CACNA1HO95180 2353 aa16.68■□□□□ 0.26
CBX4-204ENST00000495122 SYNJ2BP-COX16A0A087WUM0 186 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 ERICH4A6NGS2 130 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 AP3B1O00203 1094 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 NDUFAB1O14561 156 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 CHN1P15882 459 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 GPX6P59796 221 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 RPL10AP62906 217 aaKnown RBP16.67■□□□□ 0.26
CBX4-204ENST00000495122 PPIDQ08752 370 aaKnown RBP16.67■□□□□ 0.26
CBX4-204ENST00000495122 GALNT2Q10471 571 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 GPR17Q13304 367 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 FASTKD3Q14CZ7 662 aaKnown RBP16.67■□□□□ 0.26
CBX4-204ENST00000495122 PSMD5Q16401 504 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 ANKRD20A2Q5SQ80 823 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 ANKRD20A1Q5TYW2 823 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 FAM171A1Q5VUB5 890 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 ANKRD20A3Q5VUR7 823 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 ITPRIPL1Q6GPH6 555 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 ZNF449Q6P9G9 518 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 NLRP14Q86W24 1093 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 SMG7Q92540 1137 aaKnown RBP16.67■□□□□ 0.26
CBX4-204ENST00000495122 RNF34Q969K3 372 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 ALKBH8Q96BT7 664 aaKnown RBP16.67■□□□□ 0.26
CBX4-204ENST00000495122 CATSPERBQ9H7T0 1116 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 COX16Q9P0S2 106 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 OR12D3Q9UGF7 316 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 RABGEF1Q9UJ41 708 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 OBSL1O75147 1896 aa16.67■□□□□ 0.26
CBX4-204ENST00000495122 NUP210Q8TEM1 1887 aaPredicted RBP16.67■□□□□ 0.26
CBX4-204ENST00000495122 ATXN2Q99700 1313 aaKnown RBP16.67■□□□□ 0.26
CBX4-204ENST00000495122 TCRBV7S3A2A0A539 114 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 GOLGA8MH3BSY2 632 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 PRPF4O43172 522 aaKnown RBP eCLIP16.66■□□□□ 0.268e-7■■■□□ 15.1
CBX4-204ENST00000495122 PSMD3O43242 534 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 TBC1D4O60343 1298 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 FAM155BO75949 473 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 AVPR2P30518 371 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 PTPN5P54829 565 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 TCF15Q12870 199 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 MSS51Q4VC12 460 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 ARMC3Q5W041 872 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 ADGRD1Q6QNK2 874 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 C3orf62Q6ZUJ4 267 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 MICALCLQ6ZW33 695 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 USP34Q70CQ2 3546 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 TRABD2AQ86V40 505 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 ZNF276Q8N554 614 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 CCDC110Q8TBZ0 833 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 EDEM1Q92611 657 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 P2RY11Q96G91 374 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 C1orf74Q96LT6 269 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 CDK5RAP1Q96SZ6 601 aaKnown RBP16.66■□□□□ 0.26
CBX4-204ENST00000495122 CLSTN3Q9BQT9 956 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 NSRP1Q9H0G5 558 aaKnown RBP16.66■□□□□ 0.26
CBX4-204ENST00000495122 ABI2Q9NYB9 513 aaPredicted RBP16.66■□□□□ 0.26
CBX4-204ENST00000495122 NKIRAS1Q9NYS0 192 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 HSFX1Q9UBD0 423 aa16.66■□□□□ 0.26
CBX4-204ENST00000495122 MYO16Q9Y6X6 1858 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms