RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 CD93Q9NPY3 652 aa18.12■□□□□ 0.49
HDAC4-211ENST00000494800 TMPRSS4Q9NRS4 437 aa18.12■□□□□ 0.49
HDAC4-211ENST00000494800 MPP6Q9NZW5 540 aa18.12■□□□□ 0.49
HDAC4-211ENST00000494800 SLCO3A1Q9UIG8 710 aa18.12■□□□□ 0.49
HDAC4-211ENST00000494800 SNX10Q9Y5X0 201 aa18.12■□□□□ 0.49
HDAC4-211ENST00000494800 SPAG17Q6Q759 2223 aa18.12■□□□□ 0.49
HDAC4-211ENST00000494800 MUC22E2RYF6 1773 aaPredicted RBP18.12■□□□□ 0.49
HDAC4-211ENST00000494800 GDF9O60383 454 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 CFIP05156 583 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 C7P10643 843 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 STK19P49842 368 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 AIF1P55008 147 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 HDAC4P56524 1084 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 ZBED6P86452 979 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 FOXK2Q01167 660 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 NRG1Q02297 640 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 ELAVL3Q14576 367 aaKnown RBP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 DUOXA1Q1HG43 343 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 EFHC2Q5JST6 749 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 C9orf64Q5T6V5 341 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 SH3PXD2AQ5TCZ1 1133 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 PEAR1Q5VY43 1037 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 RWDD4Q6NW29 188 aaKnown RBP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 SCYL2Q6P3W7 929 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 USP30Q70CQ3 517 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 ZNF571Q7Z3V5 609 aaPredicted RBP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 SLFN11Q7Z7L1 901 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 CCDC114Q96M63 670 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 MTG2Q9H4K7 406 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 SGK2Q9HBY8 427 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 LUC7L2Q9Y383 392 aaKnown RBP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 SCINQ9Y6U3 715 aa18.11■□□□□ 0.49
HDAC4-211ENST00000494800 ATXN2Q99700 1313 aaKnown RBP18.11■□□□□ 0.49
HDAC4-211ENST00000494800 TCRBV5S1A1TA0A578 114 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 LNP1A1A4G5 178 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 ILVBLA1L0T0 632 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 CCP110O43303 1012 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 RTN2O75298 545 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 ADH1BP00325 375 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 FTLP02792 175 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-211ENST00000494800 MYBL1P10243 752 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 ETFBP38117 255 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 PBX1P40424 430 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 NUMBP49757 651 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 ATXN3P54252 364 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-211ENST00000494800 RPL7AP62424 266 aaKnown RBP18.1■□□□□ 0.49
HDAC4-211ENST00000494800 GFPT1Q06210 699 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-211ENST00000494800 CST6Q15828 149 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 PPP1R15BQ5SWA1 713 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 STPG1Q5TH74 334 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 SLC23A3Q6PIS1 610 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 SLC41A1Q8IVJ1 513 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 DCAF4L2Q8NA75 395 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 CPLX3Q8WVH0 158 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 ALG14Q96F25 216 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 OMDQ99983 421 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.1■□□□□ 0.49
HDAC4-211ENST00000494800 PABPC3Q9H361 631 aaKnown RBP18.1■□□□□ 0.49
HDAC4-211ENST00000494800 TMEM74BQ9NUR3 256 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 TAS2R14Q9NYV8 317 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 CAPN11Q9UMQ6 739 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 SLC6A14Q9UN76 642 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 FARP1Q9Y4F1 1045 aaPredicted RBP18.1■□□□□ 0.49
HDAC4-211ENST00000494800 OR51B4Q9Y5P0 310 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 CKAP5Q14008 2032 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 THADAQ6YHU6 1953 aa18.1■□□□□ 0.49
HDAC4-211ENST00000494800 PATE3B3GLJ2 98 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 ATP9BO43861 1147 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 SERPING1P05155 500 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 PLEKP08567 350 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-211ENST00000494800 SKILP12757 684 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 SCAPQ12770 1279 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 MAMLD1Q13495 774 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 DAB2IPQ5VWQ8 1189 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 RETSATQ6NUM9 610 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 TMC6Q7Z403 805 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 MMAAQ8IVH4 418 aaKnown RBP18.09■□□□□ 0.49
HDAC4-211ENST00000494800 CCDC185Q8N715 623 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 ATP11CQ8NB49 1132 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 OR52K2Q8NGK3 314 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 OR8D1Q8WZ84 308 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 PTPRN2Q92932 1015 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 TBC1D31Q96DN5 1066 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 SPON2Q9BUD6 331 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 MRPL47Q9HD33 250 aaKnown RBP18.09■□□□□ 0.49
HDAC4-211ENST00000494800 TMEM9BQ9NQ34 198 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 FBXL12Q9NXK8 326 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 HS3ST2Q9Y278 367 aa18.09■□□□□ 0.49
HDAC4-211ENST00000494800 METTL12A8MUP2 240 aa18.08■□□□□ 0.48
HDAC4-211ENST00000494800 DDX3XO00571 662 aaKnown RBP eCLIP18.08■□□□□ 0.48
HDAC4-211ENST00000494800 RNASEH2AO75792 299 aaKnown RBP18.08■□□□□ 0.48
HDAC4-211ENST00000494800 SEMA4FO95754 770 aa18.08■□□□□ 0.48
HDAC4-211ENST00000494800 IL1BP01584 269 aa18.08■□□□□ 0.48
HDAC4-211ENST00000494800 SYPP08247 313 aa18.08■□□□□ 0.48
HDAC4-211ENST00000494800 SERPINF2P08697 491 aa18.08■□□□□ 0.48
HDAC4-211ENST00000494800 TPM1P09493 284 aa18.08■□□□□ 0.48
HDAC4-211ENST00000494800 RHOQP17081 205 aa18.08■□□□□ 0.48
HDAC4-211ENST00000494800 C5AR1P21730 350 aa18.08■□□□□ 0.48
HDAC4-211ENST00000494800 PSMA2P25787 234 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms