RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SLC25A13Q9UJS0 675 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 ATRXP46100 2492 aa23.92■■□□□ 1.42
COL27A1-208ENST00000494780 TP53BP1Q12888 1972 aaPredicted RBP23.92■■□□□ 1.42
COL27A1-208ENST00000494780 COL5A1P20908 1838 aaPredicted RBP23.91■■□□□ 1.42
COL27A1-208ENST00000494780 WNT9AO14904 365 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 ATP9BO43861 1147 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 GRAP2O75791 330 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 ITGAVP06756 1048 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 HOXB3P14651 431 aaPredicted RBP23.91■■□□□ 1.42
COL27A1-208ENST00000494780 NUMBP49757 651 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 APBA1Q02410 837 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 AUHQ13825 339 aaKnown RBP23.91■■□□□ 1.42
COL27A1-208ENST00000494780 CCDC157Q569K6 752 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 FAM46CQ5VWP2 391 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 OR6B2Q6IFH4 312 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 OLFML1Q6UWY5 402 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 FAM183BPQ6ZVS7 135 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 OR8D1Q8WZ84 308 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 FEM1AQ9BSK4 669 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 PCDHGA1Q9Y5H4 931 aa23.91■■□□□ 1.42
COL27A1-208ENST00000494780 ACACAQ13085 2346 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 ADAMTS20P59510 1910 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.9■■□□□ 1.42
COL27A1-208ENST00000494780 TRABD2BA6NFA1 517 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 TLR4O00206 839 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 ALOX15BO15296 676 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 DAB1O75553 588 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 PON1P27169 355 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 NUDT1P36639 197 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 ARRB1P49407 418 aaPredicted RBP23.9■■□□□ 1.42
COL27A1-208ENST00000494780 NXPH1P58417 271 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 PPP2CBP62714 309 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 PPP2CAP67775 309 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 CENPCQ03188 943 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 NME3Q13232 169 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 ZNF177Q13360 481 aaPredicted RBP23.9■■□□□ 1.42
COL27A1-208ENST00000494780 CAMK2BQ13554 666 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 NAPEPLDQ6IQ20 393 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 C19orf48Q6RUI8 117 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 DHRS13Q6UX07 377 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 SLC26A9Q7LBE3 791 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 PRPF39Q86UA1 669 aaKnown RBP23.9■■□□□ 1.42
COL27A1-208ENST00000494780 MARCH9Q86YJ5 346 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 C1orf131Q8NDD1 294 aaKnown RBP23.9■■□□□ 1.42
COL27A1-208ENST00000494780 ERVMER34-1Q9H9K5 563 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 VANGL2Q9ULK5 521 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 RAXQ9Y2V3 346 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 HS3ST4Q9Y661 456 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 APC2O95996 2303 aa23.9■■□□□ 1.42
COL27A1-208ENST00000494780 ENC1O14682 589 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 PLRG1O43660 514 aaKnown RBP23.89■■□□□ 1.41
COL27A1-208ENST00000494780 CLDN11O75508 207 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 ERBB2P04626 1255 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 CDK4P11802 303 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 EPHA8P29322 1005 aaPredicted RBP23.89■■□□□ 1.41
COL27A1-208ENST00000494780 NOS2P35228 1153 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 KRT9P35527 623 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 SLC6A3Q01959 620 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 C5orf22Q49AR2 442 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 ACCSLQ4AC99 568 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 TMPRSS12Q86WS5 348 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 IRF2BP1Q8IU81 584 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 OXR1Q8N573 874 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 PDCD7Q8N8D1 485 aaKnown RBP23.89■■□□□ 1.41
COL27A1-208ENST00000494780 MFSD2AQ8NA29 543 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 ZNF397Q8NF99 534 aaPredicted RBP23.89■■□□□ 1.41
COL27A1-208ENST00000494780 OR52K2Q8NGK3 314 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 SARDHQ9UL12 918 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 PPM1HQ9ULR3 514 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 OR51B4Q9Y5P0 310 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 FREM2Q5SZK8 3169 aa23.89■■□□□ 1.41
COL27A1-208ENST00000494780 FAM149AA5PLN7 773 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 E9PAM4 449 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 C1QTNF3-AMACRE9PGA6 284 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 RTN2O75298 545 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 PAGE1O75459 146 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 LDOC1O95751 146 aaPredicted RBP23.88■■□□□ 1.41
COL27A1-208ENST00000494780 C1SP09871 688 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 IRAK1P51617 712 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 METAP1P53582 386 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 CYP4F3Q08477 520 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 DLG2Q15700 870 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 IQCHQ86VS3 1027 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 CNDP2Q96KP4 475 aaKnown RBP23.88■■□□□ 1.41
COL27A1-208ENST00000494780 SYNCQ9H7C4 482 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 RRN3Q9NYV6 651 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 ARHGAP20Q9P2F6 1191 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 VPS28Q9UK41 221 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 DMTF1Q9Y222 760 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 TBC1D30Q9Y2I9 924 aa23.88■■□□□ 1.41
COL27A1-208ENST00000494780 GOLGA4Q13439 2230 aaKnown RBP23.87■■□□□ 1.41
COL27A1-208ENST00000494780 M0QYT0 321 aa23.87■■□□□ 1.41
COL27A1-208ENST00000494780 PLK4O00444 970 aa23.87■■□□□ 1.41
COL27A1-208ENST00000494780 MCF2LO15068 1137 aa23.87■■□□□ 1.41
COL27A1-208ENST00000494780 MTIF2P46199 727 aaKnown RBP23.87■■□□□ 1.41
COL27A1-208ENST00000494780 RXRGP48443 463 aa23.87■■□□□ 1.41
COL27A1-208ENST00000494780 CDH4P55283 916 aa23.87■■□□□ 1.41
COL27A1-208ENST00000494780 OVGP1Q12889 678 aa23.87■■□□□ 1.41
COL27A1-208ENST00000494780 COL9A2Q14055 689 aaPredicted RBP23.87■■□□□ 1.41
COL27A1-208ENST00000494780 CAMK4Q16566 473 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms