RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 A0A1W2PQF6 199 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 CHURC1-FNTBB4DL54 471 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 K7ESF4 209 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ATG13O75143 517 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ERCC2P18074 760 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 PLA2G5P39877 138 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 MARCKSL1P49006 195 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 FNTBP49356 437 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 DNA2P51530 1060 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ECT2LQ008S8 904 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 GNA12Q03113 381 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 EIF4HQ15056 248 aaKnown RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 BOLA3Q53S33 107 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 SDE2Q6IQ49 451 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 NPWQ8N729 165 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 RTL3Q8N8U3 475 aaKnown RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 KCTD6Q8NC69 237 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 MDGA1Q8NFP4 955 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 LRRN4Q8WUT4 740 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 RAPGEF5Q92565 580 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 PSMB7Q99436 277 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 CD93Q9NPY3 652 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 LZTFL1Q9NQ48 299 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 TMEM248Q9NWD8 314 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 BCCIPQ9P287 314 aaKnown RBP eCLIP11.4□□□□□ -0.58
APTX-230ENST00000494649 VPS51Q9UID3 782 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ERVW-1Q9UQF0 538 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 OR51B4Q9Y5P0 310 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ALG6Q9Y672 507 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 MUC6Q6W4X9 2439 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 DOCK4Q8N1I0 1966 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 LRRD1A4D1F6 860 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ARHGAP6O43182 974 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 RAMP2O60895 175 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 MTA2O94776 668 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 SP9P0CG40 484 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ARL4AP40617 200 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 MAGEA9P43362 315 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 DGKEP52429 567 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 ST8SIA6P61647 398 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 NRG1Q02297 640 aaPredicted RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 KIF5AQ12840 1032 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 DPYSL2Q16555 572 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 EOGTQ5NDL2 527 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 FAM182AQ5T1J6 154 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 POLNQ7Z5Q5 900 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 SETD3Q86TU7 594 aaPredicted RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 FRMD1Q8N878 549 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 TPCN2Q8NHX9 752 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 RLN3Q8WXF3 142 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 RNF25Q96BH1 459 aaPredicted RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 HMCESQ96FZ2 354 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 MYO19Q96H55 970 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 MRGPRX3Q96LB0 322 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 CSPG4P5Q96PW8 444 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 IRX2Q9BZI1 471 aaPredicted RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 KLC2Q9H0B6 622 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 KCNF1Q9H3M0 494 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 NOL6Q9H6R4 1146 aaKnown RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 CATSPERBQ9H7T0 1116 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 PRMT8Q9NR22 394 aaPredicted RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 GUCA1BQ9UMX6 200 aa11.4□□□□□ -0.58
APTX-230ENST00000494649 PACSIN2Q9UNF0 486 aaPredicted RBP11.4□□□□□ -0.58
APTX-230ENST00000494649 FRYLO94915 3013 aa11.4□□□□□ -0.59
APTX-230ENST00000494649 DFFAO00273 331 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 SYNCRIPO60506 623 aaKnown RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 KRT1P04264 644 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 ARHGAP25P42331 645 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 POLD3Q15054 466 aaPredicted RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 ACBD5Q5T8D3 534 aaPredicted RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 ARHGAP36Q6ZRI8 547 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 ZNF557Q8N988 423 aaPredicted RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 ATP11CQ8NB49 1132 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 KRT35Q92764 455 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 TTC17Q96AE7 1141 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 MKRN2Q9H000 416 aaKnown RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 TMEM51Q9NW97 253 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 ILVBLA1L0T0 632 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 H3BRJ5 948 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 DCLK1O15075 740 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 SMAD6O43541 496 aaKnown RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 TIMM44O43615 452 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 FTCDO95954 541 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 IL4RP24394 825 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 MAN1A1P33908 653 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 ARF5P84085 180 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 DPYSQ14117 519 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 DPYSL3Q14195 570 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 LPAL2Q16609 132 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 POM121L1PQ3SYA9 428 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 TRMT11Q7Z4G4 463 aaKnown RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 FAM160A2Q8N612 972 aaPredicted RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 CCDC26Q8TAB7 109 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 TEKT4Q8WW24 435 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 ATOH1Q92858 354 aaPredicted RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 ARHGEF2Q92974 986 aaKnown RBP11.39□□□□□ -0.59
APTX-230ENST00000494649 GABRG3Q99928 467 aa11.39□□□□□ -0.59
APTX-230ENST00000494649 NCAPGQ9BPX3 1015 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms