RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 USP1O94782 785 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 AKR1A1P14550 325 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 SAT1P21673 171 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 CDK18Q07002 472 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 GALNT2Q10471 571 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 THOC5Q13769 683 aaKnown RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 INSCQ1MX18 579 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 CST9Q5W186 159 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 KCTD11Q693B1 232 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 SCAMP5Q8TAC9 235 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 HDAC11Q96DB2 347 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 NAF1Q96HR8 494 aaKnown RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 CLPTM1LQ96KA5 538 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 TMEM209Q96SK2 561 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 MTG1Q9BT17 334 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 THTPAQ9BU02 230 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 TMLHEQ9NVH6 421 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 TRHDEQ9UKU6 1024 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 APOBEC2Q9Y235 224 aaKnown RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 GIT1Q9Y2X7 761 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 LRRC42Q9Y546 428 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 SCN4AP35499 1836 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 A0A096LPK6 155 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 ARRB2P32121 409 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 SERPINB6P35237 376 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 ZNF157P51786 506 aaPredicted RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 IRF9Q00978 393 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 VWA5B1Q5TIE3 1220 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 ITPRIPL1Q6GPH6 555 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 ARHGAP36Q6ZRI8 547 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 METTL23Q86XA0 190 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 ARHGAP24Q8N264 748 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 TRPV1Q8NER1 839 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 ACVR1CQ8NER5 493 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 STMN2Q93045 179 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 TEKT5Q96M29 485 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 SORT1Q99523 831 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 FAM167BQ9BTA0 163 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 BRD8Q9H0E9 1235 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 CHST12Q9NRB3 414 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 RRN3Q9NYV6 651 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 INPP5FQ9Y2H2 1132 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 MTSS1O43312 755 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 PSMG1O95456 288 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 NMBRP28336 390 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 CD52P31358 61 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 RPL9P32969 192 aaKnown RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 NPY2RP49146 381 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 SERPINB8P50452 374 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 LIMK2P53671 638 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 ABCE1P61221 599 aaKnown RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 PRPSAP1Q14558 356 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 DBN1Q16643 649 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 INTS6LQ5JSJ4 861 aaKnown RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 LRRTM3Q86VH5 581 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 KCNMB4Q86W47 210 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 DQX1Q8TE96 717 aaKnown RBP11.44□□□□□ -0.58
CHMP3-209ENST00000494623 APBA2Q99767 749 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 CSNK1G1Q9HCP0 422 aa11.44□□□□□ -0.58
CHMP3-209ENST00000494623 MAGEB16A2A368 324 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 ERI2A8K979 691 aaKnown RBP11.43□□□□□ -0.58
CHMP3-209ENST00000494623 GPR182O15218 404 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 DUSP11O75319 330 aaKnown RBP11.43□□□□□ -0.58
CHMP3-209ENST00000494623 ODC1P11926 461 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 GRK2P25098 689 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 THPOP40225 353 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 IDH3AP50213 366 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 PGGT1BP53609 377 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 TUBB3Q13509 450 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 DCLRE1AQ6PJP8 1040 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 C17orf99Q6UX52 265 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 MAVSQ7Z434 540 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 SCUBE1Q8IWY4 988 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 CNTD1Q8N815 330 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 SPATA22Q8NHS9 363 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 URGCPQ8TCY9 931 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 SENP6Q9GZR1 1112 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-209ENST00000494623 MMADHCQ9H3L0 296 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-209ENST00000494623 CPSF2Q9P2I0 782 aaKnown RBP11.43□□□□□ -0.58
CHMP3-209ENST00000494623 STOML1Q9UBI4 398 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 MEI4A8MW99 385 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 C2P06681 752 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 YY1P25490 414 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 USP4Q13107 963 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 MPP3Q13368 585 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 CCDC153Q494R4 210 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 PM20D1Q6GTS8 502 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 RAPH1Q70E73 1250 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 POU5F2Q8N7G0 328 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 MAB21L3Q8N8X9 362 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 MOCOSQ96EN8 888 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 ACBD6Q9BR61 282 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 OXCT2Q9BYC2 517 aaPredicted RBP11.43□□□□□ -0.58
CHMP3-209ENST00000494623 SHCBP1LQ9BZQ2 653 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 IL22Q9GZX6 179 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 ACSS2Q9NR19 701 aa11.43□□□□□ -0.58
CHMP3-209ENST00000494623 GEMIN8Q9NWZ8 242 aaKnown RBP11.43□□□□□ -0.58
CHMP3-209ENST00000494623 SFMBT1Q9UHJ3 866 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms